RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ZBTB41Q5SVQ8 909 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 RTL10Q7L3V2 364 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PEX26Q7Z412 305 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 GPD1LQ8N335 351 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 TSEN2Q8NCE0 465 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 FBXL13Q8NEE6 735 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 SLC22A8Q8TCC7 542 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ALG3Q92685 438 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 CASP10Q92851 521 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 KRT12Q99456 494 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PI4K2AQ9BTU6 479 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 NIFKQ9BYG3 293 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ASCC2Q9H1I8 757 aaPredicted RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ELP3Q9H9T3 547 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PARVBQ9HBI1 364 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 CNGB3Q9NQW8 809 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 RAB20Q9NX57 234 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ADAM21Q9UKJ8 722 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 KIAA1257Q9ULG3 409 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 SCN4AP35499 1836 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 ZBTB42B2RXF5 422 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CASQ2O14958 399 aaPredicted RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 ATMINO43313 823 aaPredicted RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 FAM189A1O60320 539 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 DKC1O60832 514 aaKnown RBP eCLIP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 HEXIM1O94992 359 aaKnown RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 GUCA1CO95843 209 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CALCAP01258 141 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 PIGRP01833 764 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 FAM153BP0C7A2 387 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 DLATP10515 647 aaKnown RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 PRKACBP22694 351 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 ALDH3A1P30838 453 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CTNNA1P35221 906 aaKnown RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 POLE2P56282 527 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 DAB2P98082 770 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 IFI16Q16666 785 aaKnown RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 C21orf62-AS1Q17RA5 79 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 FAM153CQ494X1 144 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CCDC38Q502W7 563 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 TMEM63BQ5T3F8 832 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 TWF2Q6IBS0 349 aaKnown RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 TUBA3EQ6PEY2 450 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 ZNF365Q70YC5 407 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CCDC50Q8IVM0 306 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 ZBTB45Q96K62 511 aaPredicted RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 TSNARE1Q96NA8 513 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 TTC25Q96NG3 672 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 FAM213AQ9BRX8 229 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 HERC2P3Q9BVR0 1158 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 FAM153AQ9UHL3 310 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 TAGLN3Q9UI15 199 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 STRIP2Q9ULQ0 834 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 SLC30A1Q9Y6M5 507 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 TRIP11Q15643 1979 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 DNAJC25-GNG10A0A024R161 153 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CCDC163A0A0D9SF12 145 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 TMEM221A6NGB7 291 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 SPDYE5A6NIY4 337 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 FTLP02792 175 aaPredicted RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CYP11B1P15538 503 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 EPB42P16452 691 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 S100A1P23297 94 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 GGCXP38435 758 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 POLGP54098 1239 aaPredicted RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 EPHB4P54760 987 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 DSTNP60981 165 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 ERVK-9P63128 1117 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 PLIN5Q00G26 463 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 ENPEPQ07075 957 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CAPSQ13938 189 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 BTG3Q14201 252 aaPredicted RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 LY6KQ17RY6 165 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 HSDL1Q3SXM5 330 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 EEPD1Q7L9B9 569 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CPNE8Q86YQ8 564 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 SULF1Q8IWU6 871 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 COLGALT2Q8IYK4 626 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 AFAP1L1Q8TED9 768 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CASKIN2Q8WXE0 1202 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 PSPC1Q8WXF1 523 aaKnown RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 LZICQ8WZA0 190 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CAVIN3Q969G5 261 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 ALKBH8Q96BT7 664 aaKnown RBP5.34□□□□□ -1.55
TMEM260-210ENST00000556422 PBKQ96KB5 322 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CCDC113Q9H0I3 377 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 RNF181Q9P0P0 153 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 RBPJLQ9UBG7 517 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 RIMKLBQ9ULI2 386 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 KCNH4Q9UQ05 1017 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 TTLL3Q9Y4R7 772 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 CSADQ9Y600 493 aa5.34□□□□□ -1.55
TMEM260-210ENST00000556422 PGRMC1O00264 195 aaKnown RBP5.34□□□□□ -1.56
TMEM260-210ENST00000556422 TNFRSF10BO14763 440 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 EXTL3O43909 919 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 PHACTR2O75167 634 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 VNN1O95497 513 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 PGK2P07205 417 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 CES1P23141 567 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 GTF2H1P32780 548 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms