RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TDRD12Q587J7 1177 aaKnown RBP4.8□□□□□ -1.64
ATXN3-241ENST00000556374 FIGNQ5HY92 759 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 FAM47AQ5JRC9 791 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 C8orf74Q6P047 294 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 TRMT10BQ6PF06 316 aaKnown RBP4.8□□□□□ -1.64
ATXN3-241ENST00000556374 CRIP3Q6Q6R5 217 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 GBP6Q6ZN66 633 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 ZNF662Q6ZS27 426 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 TRAPPC11Q7Z392 1133 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 LIMS2Q7Z4I7 341 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 NEK8Q86SG6 692 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 ADGRA1Q86SQ6 560 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 NBPF5PQ86XG9 351 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-241ENST00000556374 RASAL3Q86YV0 1011 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 GIMAP8Q8ND71 665 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-241ENST00000556374 MICAL1Q8TDZ2 1067 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 NSUN4Q96CB9 384 aaKnown RBP4.8□□□□□ -1.64
ATXN3-241ENST00000556374 CAPZA3Q96KX2 299 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 SORCS2Q96PQ0 1159 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 EIF3CQ99613 913 aaKnown RBP4.8□□□□□ -1.64
ATXN3-241ENST00000556374 DNAJC7Q99615 494 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 TINF2Q9BSI4 451 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 IER2Q9BTL4 223 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 SPZ1Q9BXG8 430 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 TANGO6Q9C0B7 1094 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 EPC1Q9H2F5 836 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 BARHL2Q9NY43 387 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 PGAP2Q9UHJ9 254 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 CROTQ9UKG9 612 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 STX8Q9UNK0 236 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 HYOU1Q9Y4L1 999 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 ZNF646O15015 1829 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-241ENST00000556374 LAMA3Q16787 3333 aa4.8□□□□□ -1.64
ATXN3-241ENST00000556374 DDX60LQ5H9U9 1706 aaKnown RBP4.8□□□□□ -1.64
ATXN3-241ENST00000556374 TTC26A0AVF1 554 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 TRIM49BA6NDI0 452 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 GOLGA6BA6NDN3 693 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 GOLGA6L10A6NI86 522 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 A6NNZ2 444 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 FAM47E-STBD1D6RA91 191 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 H3BQF6 201 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 SNAP23O00161 211 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 WNT9AO14904 365 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 FZD7O75084 574 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 KNG1P01042 644 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 EN2P19622 333 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-241ENST00000556374 TACR2P21452 398 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 ACVRL1P37023 503 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 PLA2G5P39877 138 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 ARHGAP25P42331 645 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 USP14P54578 494 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 HNRNPH2P55795 449 aaKnown RBP4.79□□□□□ -1.64
ATXN3-241ENST00000556374 CDK17Q00537 523 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 SETQ01105 290 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-241ENST00000556374 APBA1Q02410 837 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 LRRC63Q05C16 580 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 SLC20A2Q08357 652 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 PPFIA1Q13136 1202 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 ICAM4Q14773 271 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 CDSNQ15517 529 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 CALCRLQ16602 461 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 MEA1Q16626 185 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 MAN2A1Q16706 1144 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 TUBB8Q3ZCM7 444 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 CCDC40Q4G0X9 1142 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 COBLL1Q53SF7 1204 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 EARS2Q5JPH6 523 aaKnown RBP4.79□□□□□ -1.64
ATXN3-241ENST00000556374 BEND6Q5SZJ8 279 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-241ENST00000556374 KRT79Q5XKE5 535 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 NCAPH2Q6IBW4 605 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 DPP8Q6V1X1 898 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-241ENST00000556374 APTXQ7Z2E3 356 aaKnown RBP4.79□□□□□ -1.64
ATXN3-241ENST00000556374 MCF2L2Q86YR7 1114 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 NIM1KQ8IY84 436 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 NLGN4XQ8N0W4 816 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 FAM76AQ8TAV0 307 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 CLEC4DQ8WXI8 215 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 TAF4BQ92750 862 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 PNKPQ96T60 521 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 C7orf25Q9BPX7 421 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 IFIH1Q9BYX4 1025 aaKnown RBP4.79□□□□□ -1.64
ATXN3-241ENST00000556374 UBXN6Q9BZV1 441 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 PRO3102Q9H379 93 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 FAM204AQ9H8W3 233 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 NHEJ1Q9H9Q4 299 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-241ENST00000556374 ADAM21Q9UKJ8 722 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 FAM184BQ9ULE4 1060 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 WASF3Q9UPY6 502 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 RRP15Q9Y3B9 282 aaKnown RBP4.79□□□□□ -1.64
ATXN3-241ENST00000556374 JRKLQ9Y4A0 524 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 ALPK3Q96L96 1907 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 SPTBN5Q9NRC6 3674 aaKnown RBP4.79□□□□□ -1.64
ATXN3-241ENST00000556374 TTC28Q96AY4 2481 aa4.79□□□□□ -1.64
ATXN3-241ENST00000556374 FAM205AQ6ZU69 1335 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 LRRC37AA6NMS7 1700 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 TAF1P21675 1872 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 PVALEFA0A1B0GWK0 134 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 ESYT2A0FGR8 921 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 MACROD2A1Z1Q3 448 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 GOLGA6CA6NDK9 693 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms