RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 GRIK1P39086 918 aa21.84■■□□□ 1.09
VTI1B-205ENST00000555543 MXI1P50539 228 aa21.84■■□□□ 1.09
VTI1B-205ENST00000555543 PFKPQ01813 784 aa21.84■■□□□ 1.09
VTI1B-205ENST00000555543 KRT39Q6A163 491 aa21.84■■□□□ 1.09
VTI1B-205ENST00000555543 TXNDC8Q6A555 127 aa21.84■■□□□ 1.09
VTI1B-205ENST00000555543 PHLDB3Q6NSJ2 640 aa21.84■■□□□ 1.09
VTI1B-205ENST00000555543 MFSD6LQ8IWD5 586 aa21.84■■□□□ 1.09
VTI1B-205ENST00000555543 DEPDC1BQ8WUY9 529 aa21.84■■□□□ 1.09
VTI1B-205ENST00000555543 DHTKD1Q96HY7 919 aaPredicted RBP21.84■■□□□ 1.09
VTI1B-205ENST00000555543 SPATA17Q96L03 361 aa21.84■■□□□ 1.09
VTI1B-205ENST00000555543 DUSP9Q99956 384 aaKnown RBP21.84■■□□□ 1.09
VTI1B-205ENST00000555543 FOXQ1Q9C009 403 aa21.84■■□□□ 1.09
VTI1B-205ENST00000555543 BRD9Q9H8M2 597 aa21.84■■□□□ 1.09
VTI1B-205ENST00000555543 STK25O00506 426 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 GDI1P31150 447 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 PLA2G5P39877 138 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 NDST1P52848 882 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 STARD6P59095 220 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 USP46P62068 366 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 TCF15Q12870 199 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 CAMK4Q16566 473 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 CBWD6Q4V339 395 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 DCAF17Q5H9S7 520 aaPredicted RBP21.83■■□□□ 1.09
VTI1B-205ENST00000555543 CBWD3Q5JTY5 395 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 CBWD5Q5RIA9 395 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 TTI2Q6NXR4 508 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 ACOT1Q86TX2 421 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 MAB21L3Q8N8X9 362 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 TWNKQ96RR1 684 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 IMPG2Q9BZV3 1241 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 ELOVL4Q9GZR5 314 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 NIF3L1Q9GZT8 377 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 HEBP1Q9NRV9 189 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 UXTQ9UBK9 157 aaPredicted RBP21.83■■□□□ 1.09
VTI1B-205ENST00000555543 CTNND2Q9UQB3 1225 aa21.83■■□□□ 1.09
VTI1B-205ENST00000555543 SHISA7A6NL88 538 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 ARNTLO00327 626 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 RFX1P22670 979 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 WEE1P30291 646 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 TCERG1LQ5VWI1 586 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 PAQR9Q6ZVX9 377 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 FAM35AQ86V20 835 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 CMTM8Q8IZV2 173 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 NELFBQ8WX92 580 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 DNASE1L2Q92874 299 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 E2F7Q96AV8 911 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 TNIP3Q96KP6 325 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 C8orf48Q96LL4 319 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 DDX23Q9BUQ8 820 aaKnown RBP21.82■■□□□ 1.08
VTI1B-205ENST00000555543 TICRRQ7Z2Z1 1910 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 CACNA1HO95180 2353 aa21.82■■□□□ 1.08
VTI1B-205ENST00000555543 TRIM66O15016 1216 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 GALR2O43603 387 aaPredicted RBP21.81■■□□□ 1.08
VTI1B-205ENST00000555543 CD72P21854 359 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 ANXA13P27216 316 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 PPP1R2P41236 205 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 PRKCQQ04759 706 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 FCHO2Q0JRZ9 810 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 INCA1Q0VD86 236 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 TPRG1Q6ZUI0 275 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 DENND5BQ6ZUT9 1274 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 FUKQ8N0W3 1084 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 FBXL13Q8NEE6 735 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 MRPS31Q92665 395 aaKnown RBP21.81■■□□□ 1.08
VTI1B-205ENST00000555543 SLC35C1Q96A29 364 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 KIAA1468Q9P260 1216 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 ARMCX3Q9UH62 379 aaPredicted RBP21.81■■□□□ 1.08
VTI1B-205ENST00000555543 CCL26Q9Y258 94 aa21.81■■□□□ 1.08
VTI1B-205ENST00000555543 KIF26AQ9ULI4 1882 aaPredicted RBP21.8■■□□□ 1.08
VTI1B-205ENST00000555543 DPYSL4O14531 572 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 STX10O60499 249 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 CCDC130P13994 396 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 DDX6P26196 483 aaKnown RBP eCLIP21.8■■□□□ 1.08
VTI1B-205ENST00000555543 STX17P56962 302 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 NHLH1Q02575 133 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 MON1AQ86VX9 555 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 UNC93AQ86WB7 457 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 CRYBG2Q8N1P7 616 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 PJA1Q8NG27 643 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 RIN3Q8TB24 985 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 WHAMMQ8TF30 809 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 IRF7Q92985 503 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 USP13Q92995 863 aaPredicted RBP21.8■■□□□ 1.08
VTI1B-205ENST00000555543 FAM122AQ96E09 287 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 SHDQ96IW2 340 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 ZFYVE19Q96K21 471 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 CEP295NLQ96MC4 621 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 CEP63Q96MT8 703 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 SLC22A12Q96S37 553 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 PRRX2Q99811 253 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 MED10Q9BTT4 135 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 TTLL2Q9BWV7 592 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 RAB20Q9NX57 234 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 OBP2AQ9NY56 170 aa21.8■■□□□ 1.08
VTI1B-205ENST00000555543 MTF2Q9Y483 593 aaPredicted RBP21.8■■□□□ 1.08
VTI1B-205ENST00000555543 ANAPC1Q9H1A4 1944 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 KANSL1LA0AUZ9 987 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 ZNF263O14978 683 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 DCNP07585 359 aaKnown RBP21.79■■□□□ 1.08
VTI1B-205ENST00000555543 GLULP15104 373 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms