RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	PTDSS1	P48651	473 aa	Known RBP	5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	SCNN1G	P51170	649 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	ITGA8	P53708	1063 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	PRKG1	Q13976	671 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	RRP1B	Q14684	758 aa	Known RBP	5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	MGAT5B	Q3V5L5	792 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	ARL6IP4	Q66PJ3	421 aa	Known RBP	5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	IGFL4	Q6B9Z1	124 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	TAF2	Q6P1X5	1199 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	KIAA0408	Q6ZU52	694 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	KRT73	Q86Y46	540 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	NSUN7	Q8NE18	718 aa	Known RBP	5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	OR56A1	Q8NGH5	318 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	GCC1	Q96CN9	775 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	LRIG1	Q96JA1	1093 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	MED15	Q96RN5	788 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	MAF1	Q9H063	256 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	FAM83D	Q9H4H8	585 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	IGSF9	Q9P2J2	1179 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	DKK4	Q9UBT3	224 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	ATP11B	Q9Y2G3	1177 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	USP15	Q9Y4E8	981 aa	Predicted RBP	5.15	□□□□□ -1.58
KTN1-222	ENST00000555506		A0A1B0GTW7	788 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	AQP7P3	A6NL99	342 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	GOLGA6L6	A8MZA4	724 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506		M0R3H8	397 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	TRIM38	O00635	465 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	DHRS4L1	P0CG22	281 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	CHRM3	P20309	590 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	GCLC	P48506	637 aa	Predicted RBP	5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	PXN	P49023	591 aa	Predicted RBP	5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	LOXL3	P58215	753 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	LILRA4	P59901	499 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	CRHR2	Q13324	411 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	RALBP1	Q15311	655 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	MAPKAPK3	Q16644	382 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	CRTC1	Q6UUV9	634 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	LAYN	Q6UX15	382 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	SLC30A10	Q6XR72	485 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	USP49	Q70CQ1	688 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	ZNF280B	Q86YH2	543 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	ANKRD18A	Q8IVF6	992 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	PLEKHG4B	Q96PX9	1271 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	MNT	Q99583	582 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	SORBS1	Q9BX66	1292 aa	Known RBP	5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	GPR87	Q9BY21	358 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	PCDHAC1	Q9H158	963 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	AS3MT	Q9HBK9	375 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	SAGE1	Q9NXZ1	904 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	CEP72	Q9P209	647 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	CTTNBP2NL	Q9P2B4	639 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	DNMT3B	Q9UBC3	853 aa	Known RBP	5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	HSFX1	Q9UBD0	423 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	NEU2	Q9Y3R4	380 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	AATK	Q6ZMQ8	1374 aa		5.14	□□□□□ -1.59
KTN1-222	ENST00000555506	DIRC3	C9JPN6	131 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	NPIPB8	E9PQR5	432 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	CYP27B1	O15528	508 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	RRP9	O43818	475 aa	Known RBP	5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	WDHD1	O75717	1129 aa	Predicted RBP	5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	SOAT2	O75908	522 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	SUN1	O94901	812 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	ITGA5	P08648	1049 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	SPATA31D3	P0C874	917 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	KCNA2	P16389	499 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	LRPAP1	P30533	357 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	APOBEC3A	P31941	199 aa	Predicted RBP	5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	ZNF134	P52741	427 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	KRT17	Q04695	432 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	ARHGAP15	Q53QZ3	475 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	SPATA31D4	Q6ZUB0	917 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	TMPRSS6	Q8IU80	811 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	GALNT15	Q8N3T1	639 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	PAF1	Q8N7H5	531 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	ZNF483	Q8TF39	744 aa	Predicted RBP	5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	STYX	Q8WUJ0	223 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	CACTIN	Q8WUQ7	758 aa	Known RBP	5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	EID2B	Q96D98	161 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	DCLRE1C	Q96SD1	692 aa	Known RBP	5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	ZNF341	Q9BYN7	854 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	SMOC2	Q9H3U7	446 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	CDY1	Q9Y6F8	540 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	CCDC78	A2IDD5	438 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506		E7ENX8	843 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	PIP5K1B	O14986	540 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	FGFR4	P22455	802 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	ATIC	P31939	592 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	MAN2A2	P49641	1150 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	DGKE	P52429	567 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	ARL4C	P56559	192 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	RNASE9	P60153	205 aa	Known RBP	5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	HSD11B2	P80365	405 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	TAP2	Q03519	686 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	OCA2	Q04671	838 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	POSTN	Q15063	836 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	SLC5A9	Q2M3M2	681 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	ZNF750	Q32MQ0	723 aa		5.13	□□□□□ -1.59
KTN1-222	ENST00000555506	ZIK1	Q3SY52	487 aa	Predicted RBP	5.13	□□□□□ -1.59

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