RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 PRMT7Q9NVM4 692 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-230ENST00000554673 CGNQ9P2M7 1197 aaKnown RBP6.28□□□□□ -1.4
ATXN3-230ENST00000554673 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-230ENST00000554673 APEX2Q9UBZ4 518 aa6.28□□□□□ -1.4
ATXN3-230ENST00000554673 TCEAL9Q9UHQ7 104 aa6.28□□□□□ -1.4
ATXN3-230ENST00000554673 HCN2Q9UL51 889 aa6.28□□□□□ -1.4
ATXN3-230ENST00000554673 ZNF215Q9UL58 517 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-230ENST00000554673 LUC7L2Q9Y383 392 aaKnown RBP6.28□□□□□ -1.4
ATXN3-230ENST00000554673 PAXBP1Q9Y5B6 917 aa6.28□□□□□ -1.4
ATXN3-230ENST00000554673 EPN1Q9Y6I3 576 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-230ENST00000554673 ANAPC1Q9H1A4 1944 aa6.28□□□□□ -1.4
ATXN3-230ENST00000554673 MROH7Q68CQ1 1323 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 NOTCH4Q99466 2003 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 A0A1W2PNR3 127 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 ZNF233A6NK53 670 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 EIF3CLB5ME19 914 aaKnown RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 O00370 1275 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 PES1O00541 588 aaKnown RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 ASAP2O43150 1006 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 PJA2O43164 708 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 ARHGAP6O43182 974 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 GREM1O60565 184 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 OFD1O75665 1012 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 MMEP08473 750 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 CLTAP09496 248 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 GHRP10912 638 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 CKBP12277 381 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 RPL13P26373 211 aaKnown RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 KIF11P52732 1056 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 EFNA5P52803 228 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 LBX1P52954 281 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 RABGGTBP53611 331 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 CRYBB1P53674 252 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 TPM4P67936 248 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 TNP2Q05952 138 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 PPP2R3AQ06190 1150 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 ZNF252P-AS1Q0IIN9 211 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 RAPGEF1Q13905 1077 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 PTGISQ16647 500 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 ARHGAP44Q17R89 818 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 C2CD6Q53TS8 623 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 CLLU1OSQ5K130 101 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 MRPL10Q7Z7H8 261 aaKnown RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 NLRP8Q86W28 1048 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 RELL1Q8IUW5 271 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 ZDHHC14Q8IZN3 488 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 GOLGA5Q8TBA6 731 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 RAET1EQ8TD07 263 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 BCL7CQ8WUZ0 217 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 KBTBD7Q8WVZ9 684 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 SYN2Q92777 582 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 BICD1Q96G01 975 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 CCDC43Q96MW1 224 aaKnown RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 MPHOSPH6Q99547 160 aaKnown RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 EIF3CQ99613 913 aaKnown RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 MRPL45Q9BRJ2 306 aaKnown RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 TRIM56Q9BRZ2 755 aaKnown RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 HERPUD2Q9BSE4 406 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 STK33Q9BYT3 514 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 EDEM3Q9BZQ6 932 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 CHRDQ9H2X0 955 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 UBE2TQ9NPD8 197 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 RAB20Q9NX57 234 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 SMARCAL1Q9NZC9 954 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 CNTN3Q9P232 1028 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 PADI3Q9ULW8 664 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 ST3GAL5Q9UNP4 418 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 GINS2Q9Y248 185 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 IPPQ9Y573 584 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.27□□□□□ -1.41
ATXN3-230ENST00000554673 TRPV2Q9Y5S1 764 aa6.27□□□□□ -1.41
ATXN3-230ENST00000554673 SMIM28A0A1B0GU29 152 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 SSU72P8A0A1W2PR75 194 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 ESYT3A0FGR9 886 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 GRID2IPA4D2P6 1211 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 C9IYK1 514 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 ARVCFO00192 962 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 TULP2O00295 520 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 PIRO00625 290 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 P4HA2O15460 535 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 CLDN3O15551 220 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 NCK2O43639 380 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 PHACTR2O75167 634 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 S100BP04271 92 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-230ENST00000554673 PDGFRBP09619 1106 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 WEE2P0C1S8 567 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 LINC00271P0C7V0 271 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 TCF4P15884 667 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 TRIM21P19474 475 aaKnown RBP6.26□□□□□ -1.41
ATXN3-230ENST00000554673 TKTP29401 623 aaKnown RBP6.26□□□□□ -1.41
ATXN3-230ENST00000554673 MARCKSL1P49006 195 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 RAD23BP54727 409 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 EPHB4P54760 987 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 NOP14P78316 857 aaKnown RBP6.26□□□□□ -1.41
ATXN3-230ENST00000554673 OGDHQ02218 1023 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 FAAP100Q0VG06 881 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 HIF1AQ16665 826 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 LRRC26Q2I0M4 334 aa6.26□□□□□ -1.41
ATXN3-230ENST00000554673 FILIP1LQ4L180 1135 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms