RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 SHDQ96IW2 340 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 MYRFLQ96LU7 910 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 GCNAQ96QF7 691 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 MRPL45Q9BRJ2 306 aaKnown RBP8.04□□□□□ -1.12
LINC00640-201ENST00000554409 DDX23Q9BUQ8 820 aaKnown RBP8.04□□□□□ -1.12
LINC00640-201ENST00000554409 SNX25Q9H3E2 840 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 ATXN3LQ9H3M9 355 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 TASP1Q9H6P5 420 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 TBC1D17Q9HA65 648 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 TRPV5Q9NQA5 729 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 OBP2AQ9NY56 170 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 MAGEC2Q9UBF1 373 aaPredicted RBP8.04□□□□□ -1.12
LINC00640-201ENST00000554409 UXTQ9UBK9 157 aaPredicted RBP8.04□□□□□ -1.12
LINC00640-201ENST00000554409 CA14Q9ULX7 337 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 NME7Q9Y5B8 376 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 PCDHA5Q9Y5H7 936 aa8.04□□□□□ -1.12
LINC00640-201ENST00000554409 ZNF638Q14966 1978 aaKnown RBP8.04□□□□□ -1.12
LINC00640-201ENST00000554409 NCANO14594 1321 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 COL4A3Q01955 1670 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 A8MXQ7 604 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 SLC16A3O15427 465 aaKnown RBP8.03□□□□□ -1.12
LINC00640-201ENST00000554409 KINO60870 393 aaKnown RBP8.03□□□□□ -1.12
LINC00640-201ENST00000554409 ATP2C2O75185 946 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 ASS1P00966 412 aaKnown RBP8.03□□□□□ -1.12
LINC00640-201ENST00000554409 HLA-DRAP01903 254 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 F11P03951 625 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 PDGFRBP09619 1106 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 KRT13P13646 458 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 P4HA1P13674 534 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 PSMC3P17980 439 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 DDX6P26196 483 aaKnown RBP eCLIP8.03□□□□□ -1.12
LINC00640-201ENST00000554409 GTF2H1P32780 548 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 PPP1R2P41236 205 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 GPR15P49685 360 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 NLRP12P59046 1061 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 PSMC1P62191 440 aaKnown RBP8.03□□□□□ -1.12
LINC00640-201ENST00000554409 LRRC63Q05C16 580 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 TCF15Q12870 199 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 MLF2Q15773 248 aaPredicted RBP8.03□□□□□ -1.12
LINC00640-201ENST00000554409 TAF12Q16514 161 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 SLC44A4Q53GD3 710 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 STXBP5Q5T5C0 1151 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 GPR158Q5T848 1215 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 FOXR2Q6PJQ5 311 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 ARID3BQ8IVW6 561 aaPredicted RBP8.03□□□□□ -1.12
LINC00640-201ENST00000554409 MFSD6LQ8IWD5 586 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 ADSSL1Q8N142 457 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 B3GALNT2Q8NCR0 500 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 OR6B3Q8NGW1 331 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 GIPC2Q8TF65 315 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 IRF7Q92985 503 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 KCTD12Q96CX2 325 aaKnown RBP8.03□□□□□ -1.12
LINC00640-201ENST00000554409 PCED1BQ96HM7 432 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 SPATA17Q96L03 361 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 TSG101Q99816 390 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 TRMT61BQ9BVS5 477 aaKnown RBP8.03□□□□□ -1.12
LINC00640-201ENST00000554409 OSBPL6Q9BZF3 934 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 IRF2BPLQ9H1B7 796 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 SLITRK6Q9H5Y7 841 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 SMYD3Q9H7B4 428 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 TMEM8AQ9HCN3 771 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 CHMP5Q9NZZ3 219 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 NXF1Q9UBU9 619 aaKnown RBP8.03□□□□□ -1.12
LINC00640-201ENST00000554409 TRIOO75962 3097 aa8.03□□□□□ -1.12
LINC00640-201ENST00000554409 ZDBF2Q9HCK1 2354 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 KANSL1LA0AUZ9 987 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 SLC38A8A6NNN8 435 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 HEPACAM2A8MVW5 462 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 ARNTLO00327 626 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 TRIM66O15016 1216 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 CETN3O15182 167 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 CHADO15335 359 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 PI15O43692 258 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 STX10O60499 249 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 GADD45BO75293 160 aaPredicted RBP8.02□□□□□ -1.13
LINC00640-201ENST00000554409 TADA3O75528 432 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 TRIM49P0CI25 452 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 TRIM49CP0CI26 452 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 EPB41P11171 864 aaKnown RBP8.02□□□□□ -1.13
LINC00640-201ENST00000554409 PTPN1P18031 435 aaKnown RBP8.02□□□□□ -1.13
LINC00640-201ENST00000554409 BDNFP23560 247 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 VIPR2P41587 438 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 PIK3CAP42336 1068 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 ASPAP45381 313 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 CDR1P51861 262 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 MLLT6P55198 1093 aaPredicted RBP8.02□□□□□ -1.13
LINC00640-201ENST00000554409 CYP4F8P98187 520 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 CYP27A1Q02318 531 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 NHLH1Q02575 133 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 PPP3CAQ08209 521 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 FCHO2Q0JRZ9 810 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 STIM1Q13586 685 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 GRM2Q14416 872 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 DDR2Q16832 855 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 MDH1BQ5I0G3 518 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 SDHAF4Q5VUM1 108 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 UNC93AQ86WB7 457 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 CCDC105Q8IYK2 499 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 CMTM8Q8IZV2 173 aa8.02□□□□□ -1.13
LINC00640-201ENST00000554409 PJA1Q8NG27 643 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms