RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 SAFBQ15424 915 aaKnown RBP eCLIP5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 MFSD14BQ5SR56 506 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 AFMIDQ63HM1 303 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 ZNF790Q6PG37 636 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 ZNF572Q7Z3I7 529 aaPredicted RBP5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 HEATR3Q7Z4Q2 680 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 C2CD5Q86YS7 1000 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 GIMAP8Q8ND71 665 aaPredicted RBP5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 FAM156AQ8NDB6 213 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 KLHDC4Q8TBB5 520 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 IFI44Q8TCB0 444 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 IPO4Q8TEX9 1081 aaKnown RBP5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 CDK5RAP3Q96JB5 506 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 MRGPRX4Q96LA9 322 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 GNRHR2Q96P88 292 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 OR14A2Q96R54 314 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 DMRTA2Q96SC8 542 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 ELAC2Q9BQ52 826 aaKnown RBP5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 PLA2G12BQ9BX93 195 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 USP44Q9H0E7 712 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 LMBRD1Q9NUN5 540 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 MOCS1Q9NZB8 636 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 FBXO2Q9UK22 296 aaPredicted RBP5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 GTF2A1LQ9UNN4 478 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 POLHQ9Y253 713 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 RABGAP1Q9Y3P9 1069 aa5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 IBTKQ9P2D0 1353 aaPredicted RBP5.92□□□□□ -1.46
MTHFD1-206ENST00000554353 AK9Q5TCS8 1911 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 COL11A2P13942 1736 aaPredicted RBP5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 SLX4Q8IY92 1834 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 ANO9A1A5B4 782 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 OTOL1A6NHN0 477 aaPredicted RBP5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 RNASEH2AO75792 299 aaKnown RBP5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 ALDH1A3P47895 512 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 PRELPP51888 382 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 HK3P52790 923 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 TERF1P54274 439 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 USP14P54578 494 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 MRPL49Q13405 166 aaKnown RBP5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 SLC4A8Q2Y0W8 1093 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 TBC1D9BQ66K14 1250 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 SLFN13Q68D06 897 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 FAM111BQ6SJ93 734 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 NPNTQ6UXI9 565 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 LCNL1Q6ZST4 164 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 ENAHQ8N8S7 591 aaPredicted RBP5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 ANKRD42Q8N9B4 389 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 SSH3Q8TE77 659 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 PARD3BQ8TEW8 1205 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 SNRNP27Q8WVK2 155 aaKnown RBP5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 TTC17Q96AE7 1141 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 SAMD11Q96NU1 681 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 KCNC2Q96PR1 638 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 LRFN3Q9BTN0 628 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 TEX13AQ9BXU3 409 aaPredicted RBP5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 ENKD1Q9H0I2 346 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 MEGF9Q9H1U4 602 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 ADAM7Q9H2U9 754 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 CALCOCO1Q9P1Z2 691 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 ABCF2Q9UG63 623 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 STAP2Q9UGK3 403 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 SCN7AQ01118 1682 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 CARMIL3Q8ND23 1372 aa5.91□□□□□ -1.46
MTHFD1-206ENST00000554353 PMS2P1A4D2B8 440 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 NPEPPSL1A6NEC2 478 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 TTC36A6NLP5 189 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 FAM227AF5H4B4 570 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 GOLIM4O00461 696 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 TPP1O14773 563 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 PMM2O15305 246 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 HOXA3O43365 443 aaPredicted RBP5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 A1BGP04217 495 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 ALOX15P16050 662 aaPredicted RBP5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 MALP21145 153 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 IL6STP40189 918 aaPredicted RBP5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 IL12RB1P42701 662 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 FLT3LGP49771 235 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 CTXN1P60606 82 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 CREMQ03060 361 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 PTH1RQ03431 593 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 TLE1Q04724 770 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 FSTL1Q12841 308 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 SP140Q13342 867 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 GRM7Q14831 915 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 RABEP1Q15276 862 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 CCDC96Q2M329 555 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 FAM47AQ5JRC9 791 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 UBXN11Q5T124 520 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 FKBP15Q5T1M5 1219 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 BEND3Q5T5X7 828 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 CHST15Q7LFX5 561 aaPredicted RBP5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 SRGAP1Q7Z6B7 1085 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 XYLT1Q86Y38 959 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 CASKIN2Q8WXE0 1202 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 ZNF622Q969S3 477 aaKnown RBP eCLIP5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 SLC35A4Q96G79 324 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 TSPAN18Q96SJ8 248 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 SELENOOQ9BVL4 669 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 TMEM60Q9H2L4 133 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 NELFAQ9H3P2 528 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms