RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 SHISA7A6NL88 538 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 A8MXQ7 604 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 P4HA1P13674 534 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 PDE6CP51160 858 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 NUCB2P80303 420 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 CSTF1Q05048 431 aaKnown RBP18.9■□□□□ 0.62
FOXN3-204ENST00000553840 DPYDQ12882 1025 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 LRRC32Q14392 662 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 CCDC142Q17RM4 750 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 MDH1BQ5I0G3 518 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 DENND5BQ6ZUT9 1274 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 STKLD1Q8NE28 680 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 TMC2Q8TDI7 906 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 ZFYVE19Q96K21 471 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 LRRC3BQ96PB8 259 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 SMG9Q9H0W8 520 aaKnown RBP18.9■□□□□ 0.62
FOXN3-204ENST00000553840 GZF1Q9H116 711 aaPredicted RBP18.9■□□□□ 0.62
FOXN3-204ENST00000553840 GTSE1Q9NYZ3 720 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 TRAF3IP3Q9Y228 551 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 R4GN57 208 aa18.9■□□□□ 0.62
FOXN3-204ENST00000553840 TRAV19A0A0A6YYK7 116 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 SPECC1L-ADORA2AF8WAN1 911 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 IKBKBO14920 756 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 MAPK13O15264 365 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 LMNAP02545 664 aaKnown RBP18.89■□□□□ 0.61
FOXN3-204ENST00000553840 USP17L7P0C7H9 530 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 PRR29P0C7W0 189 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 PTPN1P18031 435 aaKnown RBP18.89■□□□□ 0.61
FOXN3-204ENST00000553840 RPL13P26373 211 aaKnown RBP18.89■□□□□ 0.61
FOXN3-204ENST00000553840 FZD5Q13467 585 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 NCOA4Q13772 614 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 ZNF268Q14587 947 aaPredicted RBP18.89■□□□□ 0.61
FOXN3-204ENST00000553840 KCNB1Q14721 858 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 SGSM1Q2NKQ1 1148 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 ITPRIPL2Q3MIP1 535 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 TDRD10Q5VZ19 366 aaKnown RBP18.89■□□□□ 0.61
FOXN3-204ENST00000553840 USP13Q92995 863 aaPredicted RBP18.89■□□□□ 0.61
FOXN3-204ENST00000553840 ELOVL4Q9GZR5 314 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 XYLT2Q9H1B5 865 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 CHRDQ9H2X0 955 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 GDPD2Q9HCC8 539 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 TRPC7Q9HCX4 862 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 ANAPC1Q9H1A4 1944 aa18.89■□□□□ 0.61
FOXN3-204ENST00000553840 KINO60870 393 aaKnown RBP18.88■□□□□ 0.61
FOXN3-204ENST00000553840 C4BPAP04003 597 aaKnown RBP18.88■□□□□ 0.61
FOXN3-204ENST00000553840 CKMP06732 381 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 TRIM21P19474 475 aaKnown RBP18.88■□□□□ 0.61
FOXN3-204ENST00000553840 NR2F2P24468 414 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 CTHP32929 405 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 AMPD2Q01433 879 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 MTAPQ13126 283 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 DGKKQ5KSL6 1271 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 MAMSTRQ6ZN01 415 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 MAML2Q8IZL2 1156 aaPredicted RBP18.88■□□□□ 0.61
FOXN3-204ENST00000553840 ZNF687Q8N1G0 1237 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 GUF1Q8N442 669 aaKnown RBP18.88■□□□□ 0.61
FOXN3-204ENST00000553840 TTC8Q8TAM2 541 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 PLEKHO2Q8TD55 490 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 ATRIPQ8WXE1 791 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 TAF4BQ92750 862 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 TNIP3Q96KP6 325 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 C8orf48Q96LL4 319 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 GOLPH3LQ9H4A5 285 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 GKN1Q9NS71 199 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 ATP8B3O60423 1300 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 F5P12259 2224 aa18.88■□□□□ 0.61
FOXN3-204ENST00000553840 KRT13P13646 458 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 PPP3CCP48454 512 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 CCR3P51677 355 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 FAM160A1Q05DH4 1040 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 NFIL3Q16649 462 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 INTS8Q75QN2 995 aaKnown RBP18.87■□□□□ 0.61
FOXN3-204ENST00000553840 ADSSL1Q8N142 457 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 B3GALNT2Q8NCR0 500 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 FAM126AQ9BYI3 521 aaPredicted RBP18.87■□□□□ 0.61
FOXN3-204ENST00000553840 IMPG2Q9BZV3 1241 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 RMND1Q9NWS8 449 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 TRPM5Q9NZQ8 1165 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 MAPK8IP1Q9UQF2 711 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 CCL26Q9Y258 94 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 PCDHGA2Q9Y5H1 932 aa18.87■□□□□ 0.61
FOXN3-204ENST00000553840 F8VP50 259 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 TADA3O75528 432 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 CHRNB1P11230 501 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 PFKLP17858 780 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 HDCP19113 662 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 SOX9P48436 509 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 VAMP7P51809 220 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 NRLP54845 237 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 NOP14P78316 857 aaKnown RBP18.86■□□□□ 0.61
FOXN3-204ENST00000553840 DLG4P78352 724 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 TNK2Q07912 1038 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 RUNX3Q13761 415 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 ZACNQ401N2 412 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 EXOC4Q96A65 974 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 FAM83CQ9BQN1 747 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 DPEP3Q9H4B8 488 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 ZSCAN32Q9NX65 697 aa18.86■□□□□ 0.61
FOXN3-204ENST00000553840 HELZP42694 1942 aaKnown RBP18.86■□□□□ 0.61
FOXN3-204ENST00000553840 ZFHX2Q9C0A1 2572 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms