RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ADGRA3Q8IWK6 1321 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 CNTNAP2Q9UHC6 1331 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 ZMYM2Q9UBW7 1377 aa5.41□□□□□ -1.54
VTI1B-202ENST00000553619 GOLGA8IPA6NC78 632 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 GOLGA8JA6NMD2 632 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 AKR1B15C9JRZ8 316 aaPredicted RBP5.4□□□□□ -1.54
VTI1B-202ENST00000553619 TEX33O43247 280 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 TNNC2P02585 160 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 USP17L7P0C7H9 530 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 STAG3L1P0CL83 205 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 ARF4P18085 180 aaPredicted RBP5.4□□□□□ -1.54
VTI1B-202ENST00000553619 TRIM21P19474 475 aaKnown RBP5.4□□□□□ -1.54
VTI1B-202ENST00000553619 PROZP22891 400 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 FMO5P49326 533 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 RAB27AP51159 221 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 CYP24A1Q07973 514 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 RBL2Q08999 1139 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 TMEM62Q0P6H9 643 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 PSMD6Q15008 389 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 ZNF124Q15973 351 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 EXOC3L4Q17RC7 722 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 DCAF17Q5H9S7 520 aaPredicted RBP5.4□□□□□ -1.54
VTI1B-202ENST00000553619 FIGNQ5HY92 759 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 MIIPQ5JXC2 388 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 SCARA3Q6AZY7 606 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 TWF2Q6IBS0 349 aaKnown RBP5.4□□□□□ -1.54
VTI1B-202ENST00000553619 SLC39A4Q6P5W5 647 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 CACNA2D4Q7Z3S7 1137 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 NECAB2Q7Z6G3 386 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 UBE3DQ7Z6J8 389 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 CNGA4Q8IV77 575 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 BRSK2Q8IWQ3 736 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 THNSL1Q8IYQ7 743 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 SPC24Q8NBT2 197 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 C3orf58Q8NDZ4 430 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 CCDC112Q8NEF3 446 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 APBB2Q92870 758 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 SLC35C1Q96A29 364 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 PGBD4Q96DM1 585 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 SAAL1Q96ER3 474 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 EEF2KMTQ96G04 330 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 BORCS6Q96GS4 357 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 ZNF668Q96K58 619 aaPredicted RBP5.4□□□□□ -1.54
VTI1B-202ENST00000553619 ZBTB45Q96K62 511 aaPredicted RBP5.4□□□□□ -1.54
VTI1B-202ENST00000553619 PPP1R16BQ96T49 567 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 FAM213AQ9BRX8 229 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 NAA15Q9BXJ9 866 aaKnown RBP5.4□□□□□ -1.54
VTI1B-202ENST00000553619 FTHL17Q9BXU8 183 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 IMPG2Q9BZV3 1241 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 C11orf49Q9H6J7 331 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 MINDY3Q9H8M7 445 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 TMEM8AQ9HCN3 771 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 PTPRHQ9HD43 1115 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 PLCB1Q9NQ66 1216 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 RBAKQ9NYW8 714 aaPredicted RBP5.4□□□□□ -1.54
VTI1B-202ENST00000553619 ST3GAL5Q9UNP4 418 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 CYP8B1Q9UNU6 501 aa5.4□□□□□ -1.54
VTI1B-202ENST00000553619 GRIN2DO15399 1336 aa5.4□□□□□ -1.55
VTI1B-202ENST00000553619 SIP14410 1827 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 FRMPD3Q5JV73 1810 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 TMEM265A0A087WTH1 108 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 A0A1W2PQJ5 194 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 ENC1O14682 589 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 FANCGO15287 622 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 AP5Z1O43299 807 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 B4GALT4O60513 344 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 TSPAN1O60635 241 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 ZC3H11AO75152 810 aaKnown RBP eCLIP5.39□□□□□ -1.55
VTI1B-202ENST00000553619 NPTXRO95502 500 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 EOMESO95936 686 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CD4P01730 458 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CHRNA1P02708 482 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 TMEM191BP0C7N4 346 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 DLATP10515 647 aaKnown RBP5.39□□□□□ -1.55
VTI1B-202ENST00000553619 HARSP12081 509 aaKnown RBP5.39□□□□□ -1.55
VTI1B-202ENST00000553619 COL6A1P12109 1028 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CKBP12277 381 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 ITGA4P13612 1032 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 PBX1P40424 430 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 ACOT2P49753 483 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 MXI1P50539 228 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 MFAP3P55082 362 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 ZBED6P86452 979 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 MGAT3Q09327 533 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 ZNF252P-AS1Q0IIN9 211 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 PAK2Q13177 524 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 TRPC3Q13507 836 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 SYCP1Q15431 976 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 PPM1JQ5JR12 505 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 FBXO47Q5MNV8 452 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 ZNF618Q5T7W0 954 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CRELD2Q6UXH1 353 aaPredicted RBP5.39□□□□□ -1.55
VTI1B-202ENST00000553619 APTXQ7Z2E3 356 aaKnown RBP5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CCDC186Q7Z3E2 898 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 ANKRD33Q7Z3H0 272 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CBWD2Q8IUF1 395 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 WDR49Q8IV35 697 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 FAM126BQ8IXS8 530 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 RPUSD2Q8IZ73 545 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms