RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 SCRN1Q12765 414 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 NR1H3Q13133 447 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 SLC14A1Q13336 389 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 CAMK2BQ13554 666 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 TRIML1Q8N9V2 468 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 LRRC15Q8TF66 581 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 ZNF274Q96GC6 653 aaPredicted RBP15.6■□□□□ 0.09
VPS29-209ENST00000551655 PNMA5Q96PV4 448 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 IL21RQ9HBE5 538 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 CD93Q9NPY3 652 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 CALCOCO1Q9P1Z2 691 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 STK24Q9Y6E0 443 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 SFI1A8K8P3 1242 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 TK2O00142 265 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 CYP17A1P05093 508 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 USP17L7P0C7H9 530 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 XBP1P17861 261 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 MAOBP27338 520 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 MCM7P33993 719 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 KIR2DL1P43626 348 aaPredicted RBP15.59■□□□□ 0.09
VPS29-209ENST00000551655 GRIK2Q13002 908 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 MAPK7Q13164 816 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 DDR2Q16832 855 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 RUFY3Q7L099 469 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 GLRX5Q86SX6 157 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 SPPL2BQ8TCT7 592 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 SETD7Q8WTS6 366 aaKnown RBP15.59■□□□□ 0.09
VPS29-209ENST00000551655 YTHDC1Q96MU7 727 aaKnown RBP15.59■□□□□ 0.09
VPS29-209ENST00000551655 PRDM16Q9HAZ2 1276 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 GCNT4Q9P109 453 aa15.59■□□□□ 0.09
VPS29-209ENST00000551655 DAXXQ9UER7 740 aaPredicted RBP15.59■□□□□ 0.09
VPS29-209ENST00000551655 MYO18AQ92614 2054 aaKnown RBP15.59■□□□□ 0.09
VPS29-209ENST00000551655 MGAQ8IWI9 3026 aa15.58■□□□□ 0.09
VPS29-209ENST00000551655 TRAV19A0A0A6YYK7 116 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 IGHV1OR15-9A0A0B4J2B8 117 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 BTBD18B2RXH4 712 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 J3QKU1 62 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 PRPF40AO75400 957 aaKnown RBP15.58■□□□□ 0.08
VPS29-209ENST00000551655 TOM1L1O75674 476 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 NFATC1O95644 943 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 CYP11A1P05108 521 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 GABRG2P18507 467 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 CYP3A5P20815 502 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 MATR3P43243 847 aaKnown RBP eCLIP15.58■□□□□ 0.08
VPS29-209ENST00000551655 BYSLQ13895 437 aaKnown RBP15.58■□□□□ 0.08
VPS29-209ENST00000551655 SAFBQ15424 915 aaKnown RBP eCLIP15.58■□□□□ 0.08
VPS29-209ENST00000551655 CCDC142Q17RM4 750 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 BMP2KLQ5H9B9 411 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 EOGTQ5NDL2 527 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 RGL4Q8IZJ4 473 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 RUSC1Q9BVN2 902 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 PRORYQ9H606 182 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 TMEM206Q9H813 350 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 STK36Q9NRP7 1315 aa15.58■□□□□ 0.08
VPS29-209ENST00000551655 A0A1W2PQD8 194 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 KAT7O95251 611 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 CTDNEP1O95476 244 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 CSH1P0DML2 217 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 CSH2P0DML3 217 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 PSMA5P28066 241 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 WASP42768 502 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 PPP2R3AQ06190 1150 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 MCL1Q07820 350 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 ENOX2Q16206 610 aaKnown RBP15.57■□□□□ 0.08
VPS29-209ENST00000551655 C9orf57Q5W0N0 161 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 WSCD1Q658N2 575 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 RABEPKQ7Z6M1 372 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 PLEKHA5Q9HAU0 1116 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 CYP8B1Q9UNU6 501 aa15.57■□□□□ 0.08
VPS29-209ENST00000551655 CYB561D2O14569 222 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 CLDN3O15551 220 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 CDC45O75419 566 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 NFICP08651 508 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 CLTAP09496 248 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 CCT6AP40227 531 aaKnown RBP15.56■□□□□ 0.08
VPS29-209ENST00000551655 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
VPS29-209ENST00000551655 SPATA1Q5VX52 437 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 JADE1Q6IE81 842 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 PCSK4Q6UW60 755 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 SLC36A4Q6YBV0 504 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 FILIP1Q7Z7B0 1213 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 ERMNQ8TAM6 284 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 C2orf15Q8WU43 125 aaKnown RBP15.56■□□□□ 0.08
VPS29-209ENST00000551655 PNKPQ96T60 521 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 PYM1Q9BRP8 204 aaKnown RBP15.56■□□□□ 0.08
VPS29-209ENST00000551655 SLC6A17Q9H1V8 727 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 ZSWIM6Q9HCJ5 1215 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 ARHGEF4Q9NR80 690 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 DDX19AQ9NUU7 478 aaKnown RBP15.56■□□□□ 0.08
VPS29-209ENST00000551655 KIAA1522Q9P206 1035 aaPredicted RBP15.56■□□□□ 0.08
VPS29-209ENST00000551655 ORC3Q9UBD5 711 aaPredicted RBP15.56■□□□□ 0.08
VPS29-209ENST00000551655 KIAA1024Q9UPX6 916 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 PCDHB5Q9Y5E4 795 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 PTPRQQ9UMZ3 2332 aa15.56■□□□□ 0.08
VPS29-209ENST00000551655 MYMKA6NI61 221 aa15.55■□□□□ 0.08
VPS29-209ENST00000551655 E9PMD0 336 aa15.55■□□□□ 0.08
VPS29-209ENST00000551655 PIRO00625 290 aa15.55■□□□□ 0.08
VPS29-209ENST00000551655 NOL4O94818 638 aa15.55■□□□□ 0.08
VPS29-209ENST00000551655 APODP05090 189 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms