RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 NCANO14594 1321 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 BICDL2A1A5D9 508 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 NPR3P17342 541 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 PSMC3P17980 439 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 TRIM21P19474 475 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 AOC1P19801 751 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 DDX6P26196 483 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 GRIK1P39086 918 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 VIPR2P41587 438 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 MLF2Q15773 248 aaPredicted RBP18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 FOXR2Q6PJQ5 311 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 TMEM150AQ86TG1 271 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 ARID3BQ8IVW6 561 aaPredicted RBP18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 TMEM105Q8N8V8 129 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 TRIML1Q8N9V2 468 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 FBXL13Q8NEE6 735 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 NELFBQ8WX92 580 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 MRPS31Q92665 395 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 DNASE1L2Q92874 299 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 SHDQ96IW2 340 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 MYRFLQ96LU7 910 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 CEP63Q96MT8 703 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 TRMT61BQ9BVS5 477 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 BCO2Q9BYV7 579 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 ZNF518BQ9C0D4 1074 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 BRD9Q9H8M2 597 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.35■□□□□ 0.532e-11■■■■■ 173.1
CHMP1A-208ENST00000550102 EHD2Q9NZN4 543 aa18.35■□□□□ 0.53
CHMP1A-208ENST00000550102 HEPACAM2A8MVW5 462 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 F8VP50 259 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 STK25O00506 426 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 DPYSL4O14531 572 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 PRAMEF12O95522 483 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 F11P03951 625 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 WEE1P30291 646 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 NDST1P52848 882 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 INCA1Q0VD86 236 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 PAK1Q13153 545 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 PHLDB3Q6NSJ2 640 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 TTI2Q6NXR4 508 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 FAM35AQ86V20 835 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 UNC93AQ86WB7 457 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 B3GNT5Q9BYG0 378 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 CYP3A43Q9HB55 503 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 METTL14Q9HCE5 456 aaKnown RBP18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 HMGXB4Q9UGU5 601 aa18.34■□□□□ 0.53
CHMP1A-208ENST00000550102 F5P12259 2224 aa18.33■□□□□ 0.53
CHMP1A-208ENST00000550102 PPP1R3GB7ZBB8 358 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 TADA3O75528 432 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 GDI1P31150 447 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 NUBP1P53384 320 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 PRKCQQ04759 706 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 CAMK4Q16566 473 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 CCDC40Q4G0X9 1142 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 IER5LQ5T953 404 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 CLEC17AQ6ZS10 378 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 DENND5BQ6ZUT9 1274 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 ACOT1Q86TX2 421 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 MFSD6LQ8IWD5 586 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 YAF2Q8IY57 180 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 IRF7Q92985 503 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 RSPRY1Q96DX4 576 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 C8orf48Q96LL4 319 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 DUSP9Q99956 384 aaKnown RBP18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 MED10Q9BTT4 135 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 DNAI2Q9GZS0 605 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 APOBEC3GQ9HC16 384 aaKnown RBP18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 OBP2AQ9NY56 170 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 KIAA1468Q9P260 1216 aa18.33■□□□□ 0.52
CHMP1A-208ENST00000550102 SOBPA7XYQ1 873 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 CLDN5O00501 218 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 ZNF263O14978 683 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 AVPR1AP37288 418 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 STARD6P59095 220 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 CBWD6Q4V339 395 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 SLC44A4Q53GD3 710 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 CBWD3Q5JTY5 395 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 CBWD5Q5RIA9 395 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 TPRG1Q6ZUI0 275 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 FRMD5Q7Z6J6 570 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 CMTM8Q8IZV2 173 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 MAB21L3Q8N8X9 362 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 SEMA4DQ92854 862 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 SLC35C1Q96A29 364 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 SMARCD1Q96GM5 515 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 FAXDC2Q96IV6 333 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 TTLL2Q9BWV7 592 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 SLC46A2Q9BY10 475 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 DMAP1Q9NPF5 467 aaPredicted RBP18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 KRT82Q9NSB4 513 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 TMEM30AQ9NV96 361 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 RAB20Q9NX57 234 aa18.32■□□□□ 0.52
CHMP1A-208ENST00000550102 CACNA2D1P54289 1103 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 FCHO2Q0JRZ9 810 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 ORC1Q13415 861 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 WDR44Q5JSH3 913 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 TXNDC8Q6A555 127 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 FILIP1Q7Z7B0 1213 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 MON1AQ86VX9 555 aa18.31■□□□□ 0.52
CHMP1A-208ENST00000550102 PRSS33Q8NF86 280 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms