RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 PCID2Q5JVF3 399 aa5.3□□□□□ -1.56
CCDC38-208ENST00000549876 ICE2Q659A1 982 aa5.3□□□□□ -1.56
CCDC38-208ENST00000549876 PCSK9Q8NBP7 692 aaKnown RBP5.3□□□□□ -1.56
CCDC38-208ENST00000549876 C5orf34Q96MH7 638 aa5.3□□□□□ -1.56
CCDC38-208ENST00000549876 MAP3K14Q99558 947 aa5.3□□□□□ -1.56
CCDC38-208ENST00000549876 DUSP22Q9NRW4 184 aa5.3□□□□□ -1.56
CCDC38-208ENST00000549876 SH2B3Q9UQQ2 575 aa5.3□□□□□ -1.56
CCDC38-208ENST00000549876 SLC16A3O15427 465 aaKnown RBP5.29□□□□□ -1.56
CCDC38-208ENST00000549876 BCAR3O75815 825 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 IL6RP08887 468 aaPredicted RBP5.29□□□□□ -1.56
CCDC38-208ENST00000549876 ATXN1LP0C7T5 689 aaKnown RBP5.29□□□□□ -1.56
CCDC38-208ENST00000549876 TKTP29401 623 aaKnown RBP5.29□□□□□ -1.56
CCDC38-208ENST00000549876 LILRA4P59901 499 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 HOXA4Q00056 320 aaPredicted RBP5.29□□□□□ -1.56
CCDC38-208ENST00000549876 ZNF267Q14586 743 aaPredicted RBP5.29□□□□□ -1.56
CCDC38-208ENST00000549876 IQCB1Q15051 598 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 RABEP1Q15276 862 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 TRIP6Q15654 476 aaKnown RBP5.29□□□□□ -1.56
CCDC38-208ENST00000549876 GRAMD1CQ8IYS0 662 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 STAG1Q8WVM7 1258 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 C1GALT1C1Q96EU7 318 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 MRGPRX1Q96LB2 322 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 ASB2Q96Q27 587 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 MACROD1Q9BQ69 325 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 RHOBTB2Q9BYZ6 727 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 ARMT1Q9H993 441 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 PDGFCQ9NRA1 345 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 MTMR4Q9NYA4 1195 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 SERTAD3Q9UJW9 196 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 STXBP5LQ9Y2K9 1186 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 PLEKHM1Q9Y4G2 1056 aa5.29□□□□□ -1.56
CCDC38-208ENST00000549876 TLR5O60602 858 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 ALDH1L1O75891 902 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 ONECUT2O95948 504 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 IBSPP21815 317 aaPredicted RBP5.28□□□□□ -1.56
CCDC38-208ENST00000549876 ARHGAP25P42331 645 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 PXNP49023 591 aaPredicted RBP5.28□□□□□ -1.56
CCDC38-208ENST00000549876 CLCN2P51788 898 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 LOXL3P58215 753 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 MCL1Q07820 350 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 AMOTQ4VCS5 1084 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 TREML2Q5T2D2 321 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 ARHGAP40Q5TG30 622 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 PXDC1Q5TGL8 231 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 NAPRTQ6XQN6 538 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 ZDHHC17Q8IUH5 632 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 PNLDC1Q8NA58 520 aaKnown RBP5.28□□□□□ -1.56
CCDC38-208ENST00000549876 DIS3LQ8TF46 1054 aaKnown RBP5.28□□□□□ -1.56
CCDC38-208ENST00000549876 ZC3H10Q96K80 434 aaKnown RBP5.28□□□□□ -1.56
CCDC38-208ENST00000549876 PTDSS2Q9BVG9 487 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 FSD1LQ9BXM9 530 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 SARS2Q9NP81 518 aaKnown RBP5.28□□□□□ -1.56
CCDC38-208ENST00000549876 LRP12Q9Y561 859 aa5.28□□□□□ -1.56
CCDC38-208ENST00000549876 A0A088AWK7 358 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 ANKRD62A6NC57 917 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 E5RJQ4 531 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 H3BNC9 293 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 OFD1O75665 1012 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 GRPP07492 148 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 SNHG28P0DPA3 235 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 PPIFP30405 207 aaKnown RBP5.27□□□□□ -1.57
CCDC38-208ENST00000549876 KCNJ5P48544 419 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 TTF1Q15361 905 aaPredicted RBP5.27□□□□□ -1.57
CCDC38-208ENST00000549876 LAYNQ6UX15 382 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 ATG4AQ8WYN0 398 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 RITA1Q96K30 269 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 TYW1Q9NV66 732 aaKnown RBP5.27□□□□□ -1.57
CCDC38-208ENST00000549876 XPR1Q9UBH6 696 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 MED16Q9Y2X0 877 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 AFG3L2Q9Y4W6 797 aa5.27□□□□□ -1.57
CCDC38-208ENST00000549876 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.27□□□□□ -1.57
CCDC38-208ENST00000549876 ERC2O15083 957 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 AP1G1O43747 822 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 ENGP17813 658 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 VIPR2P41587 438 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 LINC00205P59089 165 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 RAB1AP62820 205 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 Q4G0T1 1027 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 IFIT1BQ5T764 474 aaKnown RBP5.26□□□□□ -1.57
CCDC38-208ENST00000549876 B3GNT9Q6UX72 402 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 CNGA4Q8IV77 575 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 CYP2W1Q8TAV3 490 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 RTFDC1Q9BY42 306 aaPredicted RBP5.26□□□□□ -1.57
CCDC38-208ENST00000549876 EBF3Q9H4W6 596 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 GABBR1Q9UBS5 961 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 STAP2Q9UGK3 403 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 CPA4Q9UI42 421 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 PNMA8BQ9ULN7 279 aaPredicted RBP5.26□□□□□ -1.57
CCDC38-208ENST00000549876 NDRG4Q9ULP0 352 aaKnown RBP5.26□□□□□ -1.57
CCDC38-208ENST00000549876 ADAMTS5Q9UNA0 930 aa5.26□□□□□ -1.57
CCDC38-208ENST00000549876 WDR17Q8IZU2 1322 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 CNTNAP2Q9UHC6 1331 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 hCG_1984214I3L0E3 225 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 FESP07332 822 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 PDGFRBP09619 1106 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 NCLP19338 710 aaKnown RBP5.25□□□□□ -1.57
CCDC38-208ENST00000549876 SLC11A2P49281 568 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 PLCD1P51178 756 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 UCP3P55916 312 aa5.25□□□□□ -1.57
CCDC38-208ENST00000549876 PIN1Q13526 163 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms