RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GCGRP47871 477 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 CXCL12P48061 93 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 PSMC1P62191 440 aaKnown RBP7.18□□□□□ -1.26
SCAF11-211ENST00000547950 CYP27A1Q02318 531 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 PON2Q15165 354 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 SNRNP35Q16560 246 aaKnown RBP7.18□□□□□ -1.26
SCAF11-211ENST00000547950 INTS6LQ5JSJ4 861 aaKnown RBP7.18□□□□□ -1.26
SCAF11-211ENST00000547950 RESP18Q5W5W9 173 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 ATL3Q6DD88 541 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 CC2D1AQ6P1N0 951 aaPredicted RBP7.18□□□□□ -1.26
SCAF11-211ENST00000547950 CNNM4Q6P4Q7 775 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 TXNDC11Q6PKC3 985 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 UNC13DQ70J99 1090 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 DPH6Q7L8W6 267 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 HS2ST1Q7LGA3 356 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 TRAPPC11Q7Z392 1133 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 TMEM150AQ86TG1 271 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 RALGPS2Q86X27 583 aaPredicted RBP7.18□□□□□ -1.26
SCAF11-211ENST00000547950 WDR49Q8IV35 697 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 CEP57L1Q8IYX8 460 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 CMTM8Q8IZV2 173 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 CELF5Q8N6W0 485 aaKnown RBP7.18□□□□□ -1.26
SCAF11-211ENST00000547950 XXYLT1Q8NBI6 393 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 RUBCNQ92622 972 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 MRPS31Q92665 395 aaKnown RBP7.18□□□□□ -1.26
SCAF11-211ENST00000547950 CYP2S1Q96SQ9 504 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 SNX25Q9H3E2 840 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 TRPC7Q9HCX4 862 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 RBM12Q9NTZ6 932 aaKnown RBP7.18□□□□□ -1.26
SCAF11-211ENST00000547950 TDP1Q9NUW8 608 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 ZSCAN32Q9NX65 697 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 OBP2AQ9NY56 170 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 MAGEC2Q9UBF1 373 aaPredicted RBP7.18□□□□□ -1.26
SCAF11-211ENST00000547950 CCL26Q9Y258 94 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 PCDHGA2Q9Y5H1 932 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 COL4A3Q01955 1670 aa7.18□□□□□ -1.26
SCAF11-211ENST00000547950 VWA8A3KMH1 1905 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 A0A1B0GVL5 298 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 PVALEFA0A1B0GWK0 134 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 PHACTR2O75167 634 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 SLFN14P0C7P3 912 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 BDNFP23560 247 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 WEE1P30291 646 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 CTHP32929 405 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 GRIK1P39086 918 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 ID4P47928 161 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 CCR3P51677 355 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 NRLP54845 237 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 MLLT6P55198 1093 aaPredicted RBP7.17□□□□□ -1.26
SCAF11-211ENST00000547950 TNNC1P63316 161 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 PRR20EP86478 221 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 PRR20CP86479 221 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 PRR20DP86480 221 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 PRR20BP86481 221 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 PRR20AP86496 221 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 SATB1Q01826 763 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 CYP24A1Q07973 514 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 EHHADHQ08426 723 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 TRPC3Q13507 836 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 GAS6Q14393 721 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 PPP2R5DQ14738 602 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 PSMD6Q15008 389 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 LPAL2Q16609 132 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 KNOP1Q1ED39 458 aaKnown RBP7.17□□□□□ -1.26
SCAF11-211ENST00000547950 ITPRIPL2Q3MIP1 535 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 WDR72Q3MJ13 1102 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 TRIM68Q6AZZ1 485 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 FAM171BQ6P995 826 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 C4orf50Q6ZRC1 276 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 MON1AQ86VX9 555 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 SUMF1Q8NBK3 374 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 ZBTB44Q8NCP5 570 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 OR6B3Q8NGW1 331 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 LEO1Q8WVC0 666 aaPredicted RBP7.17□□□□□ -1.26
SCAF11-211ENST00000547950 KBTBD7Q8WVZ9 684 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 USP13Q92995 863 aaPredicted RBP7.17□□□□□ -1.26
SCAF11-211ENST00000547950 PAGE5Q96GU1 130 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 CHAMP1Q96JM3 812 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 PKMYT1Q99640 499 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 CGRRF1Q99675 332 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 SYT15Q9BQS2 421 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 MRPL45Q9BRJ2 306 aaKnown RBP7.17□□□□□ -1.26
SCAF11-211ENST00000547950 CHRDQ9H2X0 955 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 EBF3Q9H4W6 596 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 MAGEF1Q9HAY2 307 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 ABCB6Q9NP58 842 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 CRTAC1Q9NQ79 661 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 NCDNQ9UBB6 729 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 UXTQ9UBK9 157 aaPredicted RBP7.17□□□□□ -1.26
SCAF11-211ENST00000547950 NXF1Q9UBU9 619 aaKnown RBP7.17□□□□□ -1.26
SCAF11-211ENST00000547950 CDH9Q9ULB4 789 aa7.17□□□□□ -1.26
SCAF11-211ENST00000547950 FCF1Q9Y324 198 aaKnown RBP7.17□□□□□ -1.26
SCAF11-211ENST00000547950 TRAV19A0A0A6YYK7 116 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 OTOL1A6NHN0 477 aaPredicted RBP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 A8MXQ7 604 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 GDF9O60383 454 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 NOL4O94818 638 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 ABL1P00519 1130 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 CKMP06732 381 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 ARSAP15289 507 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 869.4 ms