RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 GPR149Q86SP6 731 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 SRRM1Q8IYB3 904 aaKnown RBP4.97□□□□□ -1.61
SCAF11-210ENST00000547654 IFI44Q8TCB0 444 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 TRAPPC12Q8WVT3 735 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 KAT5Q92993 513 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 CYFIP2Q96F07 1278 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 SLC29A3Q9BZD2 475 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 UNKQ9C0B0 810 aaKnown RBP4.97□□□□□ -1.61
SCAF11-210ENST00000547654 ARMT1Q9H993 441 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 TBCCD1Q9NVR7 557 aa4.97□□□□□ -1.61
SCAF11-210ENST00000547654 A0A088AWK7 358 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 RRN3P2A6NIE6 340 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 APOL1O14791 398 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 FFAR2O15552 330 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 IRAK2O43187 625 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 SNX2O60749 519 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 MBD4O95243 580 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 IL18RAPO95256 599 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 MATN4O95460 622 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 PARP1P09874 1014 aaKnown RBP4.96□□□□□ -1.62
SCAF11-210ENST00000547654 BRAFP15056 766 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 TSHRP16473 764 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 FOXF2Q12947 444 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 INTS11Q5TA45 600 aaKnown RBP4.96□□□□□ -1.62
SCAF11-210ENST00000547654 TTLL5Q6EMB2 1281 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 FAAH2Q6GMR7 532 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 TMPRSS9Q7Z410 1059 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 TTC7BQ86TV6 843 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 TMEM132CQ8N3T6 1108 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 ACTRT2Q8TDY3 377 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 BRI3BPQ8WY22 251 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 TBC1D20Q96BZ9 403 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 ZSCAN31Q96LW9 406 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-210ENST00000547654 TTLL2Q9BWV7 592 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 UNC45AQ9H3U1 944 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 ZMAT3Q9HA38 289 aaKnown RBP4.96□□□□□ -1.62
SCAF11-210ENST00000547654 CNNM1Q9NRU3 951 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 RASSF1Q9NS23 344 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 SMC4Q9NTJ3 1288 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 SEMA4GQ9NTN9 838 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 PDP2Q9P2J9 529 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 HSFX1Q9UBD0 423 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 STAP2Q9UGK3 403 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 PCDHB1Q9Y5F3 818 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 SALL3Q9BXA9 1300 aa4.96□□□□□ -1.62
SCAF11-210ENST00000547654 A0A1B0GVC2 190 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 DNAJC9-AS1A6NH13 148 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 FAM171A2A8MVW0 826 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 PROB1E7EW31 1015 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 MGST3O14880 152 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 FIBPO43427 364 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 FGF18O76093 207 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 SBK3P0C264 359 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 SLC7A1P30825 629 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 RAP2BP61225 183 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 DSC2Q02487 901 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 IL10RAQ13651 578 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 DAG1Q14118 895 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 TOMM20Q15388 145 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 FLYWCH1Q4VC44 716 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 TSHZ3Q63HK5 1081 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 HIBCHQ6NVY1 386 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-210ENST00000547654 FAM180AQ6UWF9 173 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 CYP26C1Q6V0L0 522 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 MED25Q71SY5 747 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 SNRNP27Q8WVK2 155 aaKnown RBP4.95□□□□□ -1.62
SCAF11-210ENST00000547654 USP13Q92995 863 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-210ENST00000547654 SLC35A4Q96G79 324 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 UBXN10Q96LJ8 280 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 NT5C1BQ96P26 610 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 SEC62Q99442 399 aaKnown RBP4.95□□□□□ -1.62
SCAF11-210ENST00000547654 C7orf25Q9BPX7 421 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 HEPHQ9BQS7 1158 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 POLG2Q9UHN1 485 aa4.95□□□□□ -1.62
SCAF11-210ENST00000547654 A0A1B0GTW7 788 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 PRSS47A8MTI9 375 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 ISM1B1AKI9 464 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 H3BUI4 141 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 GPR32O75388 356 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 PYGLP06737 847 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 DHRS4L1P0CG22 281 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 DDCP20711 480 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 HSPA7P48741 367 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 RARRES1P49788 294 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 CACNA2D1P54289 1103 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 EIF5P55010 431 aaKnown RBP4.94□□□□□ -1.62
SCAF11-210ENST00000547654 CTXN1P60606 82 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 NOGQ13253 232 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 G3BP1Q13283 466 aaKnown RBP eCLIP4.94□□□□□ -1.62
SCAF11-210ENST00000547654 MZT2BQ6NZ67 158 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 GGT6Q6P531 493 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 COL23A1Q86Y22 540 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-210ENST00000547654 SUGP1Q8IWZ8 645 aaKnown RBP4.94□□□□□ -1.62
SCAF11-210ENST00000547654 SCARB1Q8WTV0 552 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 ZNF566Q969W8 418 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 FAM167AQ96KS9 214 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 RMDN3Q96TC7 470 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 ZSWIM1Q9BR11 485 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 COLEC11Q9BWP8 271 aa4.94□□□□□ -1.62
SCAF11-210ENST00000547654 TMEM120AQ9BXJ8 343 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms