RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 PCID2Q5JVF3 399 aa5.3□□□□□ -1.56
CCDC38-204ENST00000546816 ICE2Q659A1 982 aa5.3□□□□□ -1.56
CCDC38-204ENST00000546816 PCSK9Q8NBP7 692 aaKnown RBP5.3□□□□□ -1.56
CCDC38-204ENST00000546816 C5orf34Q96MH7 638 aa5.3□□□□□ -1.56
CCDC38-204ENST00000546816 MAP3K14Q99558 947 aa5.3□□□□□ -1.56
CCDC38-204ENST00000546816 DUSP22Q9NRW4 184 aa5.3□□□□□ -1.56
CCDC38-204ENST00000546816 SH2B3Q9UQQ2 575 aa5.3□□□□□ -1.56
CCDC38-204ENST00000546816 SLC16A3O15427 465 aaKnown RBP5.29□□□□□ -1.56
CCDC38-204ENST00000546816 BCAR3O75815 825 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 IL6RP08887 468 aaPredicted RBP5.29□□□□□ -1.56
CCDC38-204ENST00000546816 ATXN1LP0C7T5 689 aaKnown RBP5.29□□□□□ -1.56
CCDC38-204ENST00000546816 TKTP29401 623 aaKnown RBP5.29□□□□□ -1.56
CCDC38-204ENST00000546816 LILRA4P59901 499 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 HOXA4Q00056 320 aaPredicted RBP5.29□□□□□ -1.56
CCDC38-204ENST00000546816 ZNF267Q14586 743 aaPredicted RBP5.29□□□□□ -1.56
CCDC38-204ENST00000546816 IQCB1Q15051 598 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 RABEP1Q15276 862 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 TRIP6Q15654 476 aaKnown RBP5.29□□□□□ -1.56
CCDC38-204ENST00000546816 GRAMD1CQ8IYS0 662 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 STAG1Q8WVM7 1258 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 C1GALT1C1Q96EU7 318 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 MRGPRX1Q96LB2 322 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 ASB2Q96Q27 587 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 MACROD1Q9BQ69 325 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 RHOBTB2Q9BYZ6 727 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 ARMT1Q9H993 441 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 PDGFCQ9NRA1 345 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 MTMR4Q9NYA4 1195 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 SERTAD3Q9UJW9 196 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 STXBP5LQ9Y2K9 1186 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 PLEKHM1Q9Y4G2 1056 aa5.29□□□□□ -1.56
CCDC38-204ENST00000546816 TLR5O60602 858 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 ALDH1L1O75891 902 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 ONECUT2O95948 504 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 IBSPP21815 317 aaPredicted RBP5.28□□□□□ -1.56
CCDC38-204ENST00000546816 ARHGAP25P42331 645 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 PXNP49023 591 aaPredicted RBP5.28□□□□□ -1.56
CCDC38-204ENST00000546816 CLCN2P51788 898 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 LOXL3P58215 753 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 MCL1Q07820 350 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 AMOTQ4VCS5 1084 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 TREML2Q5T2D2 321 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 ARHGAP40Q5TG30 622 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 PXDC1Q5TGL8 231 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 NAPRTQ6XQN6 538 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 ZDHHC17Q8IUH5 632 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 PNLDC1Q8NA58 520 aaKnown RBP5.28□□□□□ -1.56
CCDC38-204ENST00000546816 DIS3LQ8TF46 1054 aaKnown RBP5.28□□□□□ -1.56
CCDC38-204ENST00000546816 ZC3H10Q96K80 434 aaKnown RBP5.28□□□□□ -1.56
CCDC38-204ENST00000546816 PTDSS2Q9BVG9 487 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 FSD1LQ9BXM9 530 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 SARS2Q9NP81 518 aaKnown RBP5.28□□□□□ -1.56
CCDC38-204ENST00000546816 LRP12Q9Y561 859 aa5.28□□□□□ -1.56
CCDC38-204ENST00000546816 A0A088AWK7 358 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 ANKRD62A6NC57 917 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 E5RJQ4 531 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 H3BNC9 293 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 OFD1O75665 1012 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 GRPP07492 148 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 SNHG28P0DPA3 235 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 PPIFP30405 207 aaKnown RBP5.27□□□□□ -1.57
CCDC38-204ENST00000546816 KCNJ5P48544 419 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 TTF1Q15361 905 aaPredicted RBP5.27□□□□□ -1.57
CCDC38-204ENST00000546816 LAYNQ6UX15 382 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 ATG4AQ8WYN0 398 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 RITA1Q96K30 269 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 TYW1Q9NV66 732 aaKnown RBP5.27□□□□□ -1.57
CCDC38-204ENST00000546816 XPR1Q9UBH6 696 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 MED16Q9Y2X0 877 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 AFG3L2Q9Y4W6 797 aa5.27□□□□□ -1.57
CCDC38-204ENST00000546816 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.27□□□□□ -1.57
CCDC38-204ENST00000546816 ERC2O15083 957 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 AP1G1O43747 822 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 ENGP17813 658 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 VIPR2P41587 438 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 LINC00205P59089 165 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 RAB1AP62820 205 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 Q4G0T1 1027 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 IFIT1BQ5T764 474 aaKnown RBP5.26□□□□□ -1.57
CCDC38-204ENST00000546816 B3GNT9Q6UX72 402 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 CNGA4Q8IV77 575 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 CYP2W1Q8TAV3 490 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 RTFDC1Q9BY42 306 aaPredicted RBP5.26□□□□□ -1.57
CCDC38-204ENST00000546816 EBF3Q9H4W6 596 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 GABBR1Q9UBS5 961 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 STAP2Q9UGK3 403 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 CPA4Q9UI42 421 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 PNMA8BQ9ULN7 279 aaPredicted RBP5.26□□□□□ -1.57
CCDC38-204ENST00000546816 NDRG4Q9ULP0 352 aaKnown RBP5.26□□□□□ -1.57
CCDC38-204ENST00000546816 ADAMTS5Q9UNA0 930 aa5.26□□□□□ -1.57
CCDC38-204ENST00000546816 WDR17Q8IZU2 1322 aa5.25□□□□□ -1.57
CCDC38-204ENST00000546816 CNTNAP2Q9UHC6 1331 aa5.25□□□□□ -1.57
CCDC38-204ENST00000546816 hCG_1984214I3L0E3 225 aa5.25□□□□□ -1.57
CCDC38-204ENST00000546816 FESP07332 822 aa5.25□□□□□ -1.57
CCDC38-204ENST00000546816 PDGFRBP09619 1106 aa5.25□□□□□ -1.57
CCDC38-204ENST00000546816 NCLP19338 710 aaKnown RBP5.25□□□□□ -1.57
CCDC38-204ENST00000546816 SLC11A2P49281 568 aa5.25□□□□□ -1.57
CCDC38-204ENST00000546816 PLCD1P51178 756 aa5.25□□□□□ -1.57
CCDC38-204ENST00000546816 UCP3P55916 312 aa5.25□□□□□ -1.57
CCDC38-204ENST00000546816 PIN1Q13526 163 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms