RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 LPCAT4Q643R3 524 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 GPAT2Q6NUI2 795 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 CRELD2Q6UXH1 353 aaPredicted RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 PRPF39Q86UA1 669 aaKnown RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 UNC5BQ8IZJ1 945 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 UBA3Q8TBC4 463 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 ZBED3Q96IU2 234 aaPredicted RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 DNAJC1Q96KC8 554 aaKnown RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 MXRA8Q9BRK3 442 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 NGRNQ9NPE2 291 aaKnown RBP15.36■□□□□ 0.05
HOXC11-202ENST00000546378 RHBDL2Q9NX52 303 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 SLC9A2Q9UBY0 812 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 TTLL3Q9Y4R7 772 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 ADGRA3Q8IWK6 1321 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 LAMB1P07942 1786 aa15.36■□□□□ 0.05
HOXC11-202ENST00000546378 E5RJQ4 531 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 PIK3CDO00329 1044 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 ASMTLO95671 621 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 TNFSF9P41273 254 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 ARL4CP56559 192 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 CROCCP2Q86T23 111 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 ERLEC1Q96DZ1 483 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 MTMR12Q9C0I1 747 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 POLR3FQ9H1D9 316 aaPredicted RBP15.35■□□□□ 0.05
HOXC11-202ENST00000546378 VCXQ9H320 206 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 MAN1C1Q9NR34 630 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 FBXO40Q9UH90 709 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 NEMP1O14524 444 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 FCHO1O14526 889 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 EDF1O60869 148 aaKnown RBP15.35■□□□□ 0.05
HOXC11-202ENST00000546378 DRG2P55039 364 aaKnown RBP15.35■□□□□ 0.05
HOXC11-202ENST00000546378 DEUP1Q05D60 604 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 MAMLD1Q13495 774 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 TRPC3Q13507 836 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 CHI3L2Q15782 390 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 BMT2Q1RMZ1 405 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 GALNTL6Q49A17 601 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 TMCO4Q5TGY1 634 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 DPY19L2Q6NUT2 758 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 UNC45BQ8IWX7 931 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 GPC2Q8N158 579 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 DEPTORQ8TB45 409 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 ZNF516Q92618 1163 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 FAF2Q96CS3 445 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 SMYD2Q9NRG4 433 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 RAB6BQ9NRW1 208 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 STOML1Q9UBI4 398 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 AQP5P55064 265 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 MKRN3Q13064 507 aaKnown RBP15.35■□□□□ 0.05
HOXC11-202ENST00000546378 PTAR1Q7Z6K3 402 aaPredicted RBP15.35■□□□□ 0.05
HOXC11-202ENST00000546378 EIF1ADQ8N9N8 165 aaKnown RBP15.35■□□□□ 0.05
HOXC11-202ENST00000546378 CD101Q93033 1021 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 WNK4Q96J92 1243 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 SYT11Q9BT88 431 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 EHMT1Q9H9B1 1298 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 DMAC2Q9NW81 257 aa15.35■□□□□ 0.05
HOXC11-202ENST00000546378 PSMC3IPQ9P2W1 217 aaPredicted RBP15.35■□□□□ 0.05
HOXC11-202ENST00000546378 WDR64B1ANS9 1081 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 COPEO14579 308 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 TBX3O15119 743 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 STAM2O75886 525 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 PROSCO94903 275 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 SKIP12755 728 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 PTK6Q13882 451 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 BAATQ14032 418 aaPredicted RBP15.34■□□□□ 0.05
HOXC11-202ENST00000546378 RASA2Q15283 850 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 TKFCQ3LXA3 575 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 PDIK1LQ8N165 341 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 LRRC71Q8N4P6 559 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 GSTCDQ8NEC7 633 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 SNRNP27Q8WVK2 155 aaKnown RBP15.34■□□□□ 0.05
HOXC11-202ENST00000546378 NRG4Q8WWG1 115 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 NUB1Q9Y5A7 615 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 KBTBD13C9JR72 458 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 I3L4J1 428 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 TJP3O95049 919 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 CST3P01034 146 aaPredicted RBP15.34■□□□□ 0.05
HOXC11-202ENST00000546378 CYP1A2P05177 515 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 KCNA4P22459 653 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 VWA5B1Q5TIE3 1220 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 TDRD10Q5VZ19 366 aaKnown RBP15.34■□□□□ 0.05
HOXC11-202ENST00000546378 LRRC74BQ6ZQY2 392 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 IGDCC3Q8IVU1 814 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 AGGF1Q8N302 714 aaeCLIP15.34■□□□□ 0.05
HOXC11-202ENST00000546378 ATG4CQ96DT6 458 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 TMEM8AQ9HCN3 771 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 DDX18Q9NVP1 670 aaKnown RBP15.34■□□□□ 0.05
HOXC11-202ENST00000546378 NENFQ9UMX5 172 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 BRCA2P51587 3418 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 K7ERI5 159 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 CIB2O75838 187 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 CCNE2O96020 404 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 RBP3P10745 1247 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 SP100P23497 879 aaPredicted RBP15.34■□□□□ 0.05
HOXC11-202ENST00000546378 IRX1P78414 480 aaPredicted RBP15.34■□□□□ 0.05
HOXC11-202ENST00000546378 OLFML2BQ68BL8 750 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 MFSD5Q6N075 450 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 SH3GL3Q99963 347 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 BATF3Q9NR55 127 aa15.34■□□□□ 0.05
HOXC11-202ENST00000546378 AGO2Q9UKV8 859 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms