RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TMEM175Q9BSA9 504 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 C17orf80Q9BSJ5 609 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 NAT10Q9H0A0 1025 aaKnown RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 GZF1Q9H116 711 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 CWH43Q9H720 699 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 NRDE2Q9H7Z3 1164 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 SLC28A3Q9HAS3 691 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 MARCH5Q9NX47 278 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 CACNG4Q9UBN1 327 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 DNAJB4Q9UDY4 337 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 MTUS1Q9ULD2 1270 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 PRG3Q9Y2Y8 225 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-211ENST00000546304 NFE2L3Q9Y4A8 694 aa6.83□□□□□ -1.32
PRKDC-211ENST00000546304 SF3B1O75533 1304 aaKnown RBP eCLIP6.82□□□□□ -1.32
PRKDC-211ENST00000546304 A0A1W2PP55 124 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 LRRIQ3A6PVS8 624 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-211ENST00000546304 C5orf67F2Z3F1 127 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 F8W810 466 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 TMEM189-UBE2V1I3L0A0 370 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 PODXLO00592 558 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 ADAM11O75078 769 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 FGFR1OPO95684 399 aaKnown RBP6.82□□□□□ -1.32
PRKDC-211ENST00000546304 GNA14O95837 355 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 TNNC2P02585 160 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 TNNI1P19237 187 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 CYP3A5P20815 502 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 LRPAP1P30533 357 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 OR1G1P47890 313 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 ALDH7A1P49419 539 aaKnown RBP6.82□□□□□ -1.32
PRKDC-211ENST00000546304 MXI1P50539 228 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 CLCNKBP51801 687 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 VAMP7P51809 220 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 ERVK-21P61565 698 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 ZBTB6Q15916 424 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 DUOXA2Q1HG44 320 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 EPC2Q52LR7 807 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 HABP4Q5JVS0 413 aaKnown RBP6.82□□□□□ -1.32
PRKDC-211ENST00000546304 PRSS36Q5K4E3 855 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 TCERG1LQ5VWI1 586 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 SPATA1Q5VX52 437 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 KCNT2Q6UVM3 1135 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 FAM114A1Q8IWE2 563 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 SLC39A11Q8N1S5 342 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 AGGF1Q8N302 714 aaeCLIP6.82□□□□□ -1.32
PRKDC-211ENST00000546304 AOPEPQ8N6M6 819 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 C3orf58Q8NDZ4 430 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 OR5B17Q8NGF7 314 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 ENOX1Q8TC92 643 aaKnown RBP6.82□□□□□ -1.32
PRKDC-211ENST00000546304 PARD3BQ8TEW8 1205 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 HASPINQ8TF76 798 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 GDPD5Q8WTR4 605 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 BCL7CQ8WUZ0 217 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-211ENST00000546304 TMEM169Q96HH4 297 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 ANKRD36BP1Q96IX9 119 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 BPIFA3Q9BQP9 254 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 PAAF1Q9BRP4 392 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 C11orf84Q9BUA3 381 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-211ENST00000546304 RBCK1Q9BYM8 510 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 THAP9Q9H5L6 903 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 SOX17Q9H6I2 414 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-211ENST00000546304 INTS13Q9NVM9 706 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 MIOSQ9NXC5 875 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 ARMCX3Q9UH62 379 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-211ENST00000546304 ITGA11Q9UKX5 1188 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 PCDHB12Q9Y5F1 795 aa6.82□□□□□ -1.32
PRKDC-211ENST00000546304 EPOPA6NHQ4 379 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 NRP1O14786 923 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 PPEF2O14830 753 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 IKBKBO14920 756 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 EIF4EBP3O60516 100 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-211ENST00000546304 FGF18O76093 207 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 B3GAT3O94766 335 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 CAVIN2O95810 425 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 ITGB3P05106 788 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 ITGB1P05556 798 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 GALTP07902 379 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 GLB1P16278 677 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 POLR2BP30876 1174 aaKnown RBP6.81□□□□□ -1.32
PRKDC-211ENST00000546304 RPL9P32969 192 aaKnown RBP6.81□□□□□ -1.32
PRKDC-211ENST00000546304 BMPR1AP36894 532 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 PIK3CAP42336 1068 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 ARL4DP49703 201 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 ZNF165P49910 485 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 AP3M2P53677 418 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 ZNF445P59923 1031 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 DLG4P78352 724 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 MYL7Q01449 175 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 C19orf57Q0VDD7 668 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 BIRC3Q13489 604 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 UPP1Q16831 310 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 HSP90AA4PQ58FG1 418 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 C1orf220Q5T0J3 134 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 CDKAL1Q5VV42 579 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 TDRD10Q5VZ19 366 aaKnown RBP6.81□□□□□ -1.32
PRKDC-211ENST00000546304 C9orf57Q5W0N0 161 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 LRSAM1Q6UWE0 723 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 PRR23CQ6ZRP0 262 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 ACAD11Q709F0 780 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 FRMD5Q7Z6J6 570 aa6.81□□□□□ -1.32
PRKDC-211ENST00000546304 FILIP1Q7Z7B0 1213 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms