RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 NLRP9Q7RTR0 991 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 CCDC125Q86Z20 511 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 RFX6Q8HWS3 928 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 FAM13CQ8NE31 585 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 ACO2Q99798 780 aaKnown RBP16.57■□□□□ 0.24
LDLR-204ENST00000545707 CALN1Q9BXU9 219 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 XYLT2Q9H1B5 865 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 KANSL3Q9P2N6 904 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 XPO7Q9UIA9 1087 aaKnown RBP16.57■□□□□ 0.24
LDLR-204ENST00000545707 ZMYND8Q9ULU4 1186 aaPredicted RBP16.57■□□□□ 0.24
LDLR-204ENST00000545707 H0Y3Z8 333 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 B4GALT5O43286 388 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 FARP2O94887 1054 aaPredicted RBP16.57■□□□□ 0.24
LDLR-204ENST00000545707 PTPN7P35236 360 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 TCF7P36402 384 aaPredicted RBP16.57■□□□□ 0.24
LDLR-204ENST00000545707 OAZ1P54368 228 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 LY6KQ17RY6 165 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 ANKRD20A2Q5SQ80 823 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 ANKRD20A1Q5TYW2 823 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 ANKRD20A3Q5VUR7 823 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 PPP1R2P3Q6NXS1 205 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 ZC3H18Q86VM9 953 aaKnown RBP16.57■□□□□ 0.24
LDLR-204ENST00000545707 LRRC6Q86X45 466 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 ZNF276Q8N554 614 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 ATP11CQ8NB49 1132 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 KCTD6Q8NC69 237 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 LRRN4Q8WUT4 740 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 RAB3IPQ96QF0 476 aaPredicted RBP16.57■□□□□ 0.24
LDLR-204ENST00000545707 LBHD1Q9BQE6 289 aaPredicted RBP16.57■□□□□ 0.24
LDLR-204ENST00000545707 MRPL4Q9BYD3 311 aaKnown RBP16.57■□□□□ 0.24
LDLR-204ENST00000545707 SYNCQ9H7C4 482 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 AS3MTQ9HBK9 375 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 HMGXB4Q9UGU5 601 aa16.57■□□□□ 0.24
LDLR-204ENST00000545707 AVILO75366 819 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 CSDE1O75534 798 aaKnown RBP16.56■□□□□ 0.24
LDLR-204ENST00000545707 PRKCBP05771 671 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 HOXC6P09630 235 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 SLC18A1P54219 525 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 LAMTOR4Q0VGL1 99 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 ADGRD1Q6QNK2 874 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 NIPA2Q8N8Q9 360 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 TRAPPC12Q8WVT3 735 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 TWNKQ96RR1 684 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 R3HDMLQ9H3Y0 253 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 CYLDQ9NQC7 956 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 NRBP2Q9NSY0 501 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 CPSF3Q9UKF6 684 aaKnown RBP16.56■□□□□ 0.24
LDLR-204ENST00000545707 IGKV6D-21A0A0A0MT36 114 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 A0A0G2JND7 137 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 SIGLEC16A6NMB1 481 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 OGTO15294 1046 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 DCTN3O75935 186 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 ERBB2P04626 1255 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 EIF3EP60228 445 aaKnown RBP16.56■□□□□ 0.24
LDLR-204ENST00000545707 ZPBP2Q6X784 338 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 BBS12Q6ZW61 710 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 TTC8Q8TAM2 541 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 MZB1Q8WU39 189 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 DCAKDQ8WVC6 231 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 ZNF518BQ9C0D4 1074 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 ACSS3Q9H6R3 686 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 SLC5A4Q9NY91 659 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 ZFP69BQ9UJL9 534 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 PCDHGC3Q9UN70 934 aa16.56■□□□□ 0.24
LDLR-204ENST00000545707 C2orf71A6NGG8 1288 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 MAFO75444 373 aaPredicted RBP16.55■□□□□ 0.24
LDLR-204ENST00000545707 MAP3K6O95382 1288 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 PAX7P23759 505 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 MIPP30301 263 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 CDH5P33151 784 aaPredicted RBP16.55■□□□□ 0.24
LDLR-204ENST00000545707 PHBP35232 272 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 GCLCP48506 637 aaPredicted RBP16.55■□□□□ 0.24
LDLR-204ENST00000545707 TMEM132AQ24JP5 1023 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 EEF1DP3Q658K8 133 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 BZW1Q7L1Q6 419 aaKnown RBP16.55■□□□□ 0.24
LDLR-204ENST00000545707 PRR11Q96HE9 360 aaPredicted RBP16.55■□□□□ 0.24
LDLR-204ENST00000545707 FAM167BQ9BTA0 163 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 SDCBP2Q9H190 292 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 ABLIM1O14639 778 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 PEX11AO75192 247 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 ENTPD5O75356 428 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 ZWINTO95229 277 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 RBP3P10745 1247 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 ELK3P41970 407 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 TAP1Q03518 808 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 DLK2Q6UY11 383 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 POLNQ7Z5Q5 900 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 BANPQ8N9N5 519 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 SERAC1Q96JX3 654 aa16.55■□□□□ 0.24
LDLR-204ENST00000545707 RLFQ13129 1914 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 FAM155BO75949 473 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 KRT7P08729 469 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 ICAM3P32942 547 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 RFC5P40937 340 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 YWHAEP62258 255 aaKnown RBP16.54■□□□□ 0.24
LDLR-204ENST00000545707 DPYSL3Q14195 570 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 HADHQ16836 314 aaKnown RBP16.54■□□□□ 0.24
LDLR-204ENST00000545707 PARP6Q2NL67 630 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 ANGEL2Q5VTE6 544 aaKnown RBP16.54■□□□□ 0.24
LDLR-204ENST00000545707 DCAF15Q66K64 600 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms