RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 TSHZ1Q6ZSZ6 1077 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 ZNF280BQ86YH2 543 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 SLC15A3Q8IY34 581 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 CCDC146Q8IYE0 955 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 TOR1AIP2Q8NFQ8 470 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 SMCR8Q8TEV9 937 aaPredicted RBP2.86□□□□□ -1.95
YBX3-214ENST00000544501 ATRIPQ8WXE1 791 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 BRI3BPQ8WY22 251 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 RAPGEF4Q8WZA2 1011 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 FKBP10Q96AY3 582 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 PDLIM2Q96JY6 352 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 PBKQ96KB5 322 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 SNX22Q96L94 193 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 TRIM5Q9C035 493 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 CHST8Q9H2A9 424 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 FAM83DQ9H4H8 585 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 STARD7Q9NQZ5 370 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 TRMT13Q9NUP7 481 aaKnown RBP2.86□□□□□ -1.95
YBX3-214ENST00000544501 EHD3Q9NZN3 535 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 LRIT1Q9P2V4 623 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 ING1Q9UK53 422 aaPredicted RBP2.86□□□□□ -1.95
YBX3-214ENST00000544501 CAPN11Q9UMQ6 739 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 ADGRA2Q96PE1 1338 aa2.86□□□□□ -1.95
YBX3-214ENST00000544501 CCDC194A0A1B0GVG4 234 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 AQP7P3A6NL99 342 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 CLCA1A8K7I4 914 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 ADM5C9JUS6 153 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 F8W8V4 182 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 hCG_1984214I3L0E3 225 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 AREL1O15033 823 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 PPM1DO15297 605 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 SLC16A3O15427 465 aaKnown RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 THAP12O43422 761 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 CSF1RP07333 972 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 PARP1P09874 1014 aaKnown RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 TYRP1P17643 537 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 BTF3P20290 206 aaKnown RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 ACVR2AP27037 513 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 IL1R2P27930 398 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 GRIA3P42263 894 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 CARSP49589 748 aaKnown RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 PRIM2P49643 509 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 CPT1AP50416 773 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 PDE6CP51160 858 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 ATXN1P54253 815 aaKnown RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 PRKAG1P54619 331 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 HDAC1Q13547 482 aaPredicted RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 BMPR2Q13873 1038 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 CCNIQ14094 377 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 ARHGEF7Q14155 803 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 SLC29A2Q14542 456 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 ZNF169Q14929 603 aaPredicted RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 TBCCQ15814 346 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 TXNRD1Q16881 649 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 ZIK1Q3SY52 487 aaPredicted RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 RGS7BPQ6MZT1 257 aaPredicted RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 ZDHHC24Q6UX98 284 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 UNC13DQ70J99 1090 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 RNF44Q7L0R7 432 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 SPARTQ8N0X7 666 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 RNF152Q8N8N0 203 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 ATP11CQ8NB49 1132 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 SVIPQ8NHG7 77 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 CAGE1Q8TC20 777 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 BPIFB1Q8TDL5 484 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 ACTRT2Q8TDY3 377 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 RFKQ969G6 155 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 PPP2R3CQ969Q6 453 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 RSPRY1Q96DX4 576 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 CHFRQ96EP1 664 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 ZNF668Q96K58 619 aaPredicted RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 TBCBQ99426 244 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 STK31Q9BXU1 1019 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 EIF2AQ9BY44 585 aaKnown RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 CXorf36Q9H7Y0 433 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 FOXJ2Q9P0K8 574 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 DNMT3BQ9UBC3 853 aaKnown RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 DKK4Q9UBT3 224 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 SERTAD3Q9UJW9 196 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 HDAC9Q9UKV0 1011 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 CORO2BQ9UQ03 480 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 MRPS17Q9Y2R5 130 aaKnown RBP2.85□□□□□ -1.95
YBX3-214ENST00000544501 DMRT1Q9Y5R6 373 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 CDY1Q9Y6F8 540 aa2.85□□□□□ -1.95
YBX3-214ENST00000544501 A0A1W2PPC4 97 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 POM121BA6NF01 834 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 VWC2LB2RUY7 222 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 RASA4BC9J798 803 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 GCOM1H8Y6P7 765 aaPredicted RBP2.84□□□□□ -1.95
YBX3-214ENST00000544501 KPNA5O15131 536 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 RASA4O43374 803 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 URI1O94763 535 aaPredicted RBP2.84□□□□□ -1.95
YBX3-214ENST00000544501 A1BGP04217 495 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 CHRM2P08172 466 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 TSHRP16473 764 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 ZFXP17010 805 aaPredicted RBP2.84□□□□□ -1.95
YBX3-214ENST00000544501 PRKAR1BP31321 381 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 CXCR5P32302 372 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 STT3AP46977 705 aa2.84□□□□□ -1.95
YBX3-214ENST00000544501 PTDSS1P48651 473 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms