RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 IQCF3P0C7M6 154 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 TSHRP16473 764 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 KDELR1P24390 212 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 IL1R2P27930 398 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 STX2P32856 288 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 OTUD4Q01804 1114 aaKnown RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 MPP2Q14168 576 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 R3HDM1Q15032 1099 aaKnown RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 LRRC14Q15048 493 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ICE2Q659A1 982 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 JADE1Q6IE81 842 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 CYP4F22Q6NT55 531 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 DLK2Q6UY11 383 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 PPIL6Q8IXY8 311 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 SRRM1Q8IYB3 904 aaKnown RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 GBP7Q8N8V2 638 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 CMASQ8NFW8 434 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ACTL9Q8TC94 416 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 EMID1Q96A84 441 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ACSF2Q96CM8 615 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 GRAMD1AQ96CP6 724 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 POM121Q96HA1 1249 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 TMEM176AQ96HP8 235 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 TWNKQ96RR1 684 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ELOVL4Q9GZR5 314 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 SMYD3Q9H7B4 428 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 KCNK9Q9NPC2 374 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ITGA11Q9UKX5 1188 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 KIAA1257Q9ULG3 409 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 SMG5Q9UPR3 1016 aaKnown RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 APOC4-APOC2K7ER74 178 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 CST8O60676 142 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 APOC2P02655 101 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 LGALS2P05162 132 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 INSRRP14616 1297 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ETS1P14921 441 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 GPD2P43304 727 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 MYO1EQ12965 1108 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 CBLBQ13191 982 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 TMED2Q15363 201 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 HIF1AQ16665 826 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 EFHC2Q5JST6 749 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 NUGGCQ68CJ6 796 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 RGS9BPQ6ZS82 235 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ARMCX2Q7L311 632 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 KIAA0319LQ8IZA0 1049 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 FUKQ8N0W3 1084 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ANKRD42Q8N9B4 389 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 NAT8LQ8N9F0 302 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 MGARPQ8TDB4 240 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 CDCA5Q96FF9 252 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 TMEM121Q9BTD3 319 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 RNPEPQ9H4A4 650 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 SYNCQ9H7C4 482 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 SSU72Q9NP77 194 aaKnown RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 VTA1Q9NP79 307 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 TJP2Q9UDY2 1190 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 BARX2Q9UMQ3 279 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 M0QYV0 167 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 RNF8O76064 485 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ENDOD1O94919 500 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ASMTLO95671 621 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 GH1P01241 217 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 CTCFP49711 727 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ZNF143P52747 638 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 CDH8P55286 799 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ARL4CP56559 192 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 IL9RQ01113 521 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 TMEM132DQ14C87 1099 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 FASTKD3Q14CZ7 662 aaKnown RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 STILQ15468 1287 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ZC3H12AQ5D1E8 599 aaKnown RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 CHADLQ6NUI6 762 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 SPATA21Q7Z572 469 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 CDR2LQ86X02 465 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ZBED8Q8IZ13 594 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ATP11CQ8NB49 1132 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 PPTC7Q8NI37 304 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 AFG1LQ8WV93 481 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 CPT1BQ92523 772 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 HAUS1Q96CS2 278 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 TGS1Q96RS0 853 aaKnown RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ZWILCHQ9H900 591 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 RSAD1Q9HA92 442 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 PDGFCQ9NRA1 345 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 KLC4Q9NSK0 619 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 FGFR1OP2Q9NVK5 253 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ASNSD1Q9NWL6 643 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 PSMC3IPQ9P2W1 217 aaPredicted RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 PRKAG3Q9UGI9 489 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 HMGXB4Q9UGU5 601 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 TBK1Q9UHD2 729 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 ARL2BPQ9Y2Y0 163 aa6.87□□□□□ -1.31
PTPRO-208ENST00000542557 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.87□□□□□ -1.31
PTPRO-208ENST00000542557 PLXNB2O15031 1838 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 EVPLQ92817 2033 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.86□□□□□ -1.31
PTPRO-208ENST00000542557 A0A087WZ62 844 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 CFAP73A6NFT4 308 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms