RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 GRIK1P39086 918 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 RPL10AP62906 217 aaKnown RBP10.36□□□□□ -0.75
YBX3-212ENST00000542002 KCNH2Q12809 1159 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 LRMPQ12912 555 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 CCDC40Q4G0X9 1142 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 VSTM1Q6UX27 236 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 C4orf50Q6ZRC1 276 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 ITIH5Q86UX2 942 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 UNC93AQ86WB7 457 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 LEMD2Q8NC56 503 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 ZMIZ2Q8NF64 920 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 ZSCAN18Q8TBC5 510 aaPredicted RBP10.36□□□□□ -0.75
YBX3-212ENST00000542002 SMARCD2Q92925 531 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 NXPE3Q969Y0 559 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 SPATA17Q96L03 361 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 MYRFLQ96LU7 910 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 CYP2S1Q96SQ9 504 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 SMOQ99835 787 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 SMG9Q9H0W8 520 aaKnown RBP10.36□□□□□ -0.75
YBX3-212ENST00000542002 CYP3A43Q9HB55 503 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 TRPV4Q9HBA0 871 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 DUSP12Q9UNI6 340 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 KRBA1A5PL33 1030 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 TNFRSF10BO14763 440 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 ECI2O75521 394 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 PGFP49763 221 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 RAD23BP54727 409 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 GRM2Q14416 872 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 VEPH1Q14D04 833 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 MAPRE1Q15691 268 aaKnown RBP10.35□□□□□ -0.75
YBX3-212ENST00000542002 ZNF394Q53GI3 561 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 GPR158Q5T848 1215 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 TXNDC8Q6A555 127 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 VITQ6UXI7 678 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 MTSS1LQ765P7 747 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 BMP8AQ7Z5Y6 402 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 ARID3BQ8IVW6 561 aaPredicted RBP10.35□□□□□ -0.75
YBX3-212ENST00000542002 UBR7Q8N806 425 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 SLC4A11Q8NBS3 891 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 EHBP1Q8NDI1 1231 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 SCAMP5Q8TAC9 235 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 SLC2A14Q8TDB8 520 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 KAT5Q92993 513 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 PBXIP1Q96AQ6 731 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 ELSPBP1Q96BH3 223 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 TRMT2BQ96GJ1 504 aaKnown RBP10.35□□□□□ -0.75
YBX3-212ENST00000542002 C8orf48Q96LL4 319 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 SLC22A12Q96S37 553 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 CISHQ9NSE2 258 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 FAM49BQ9NUQ9 324 aa10.35□□□□□ -0.75
YBX3-212ENST00000542002 DOCK8Q8NF50 2099 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 MYO10Q9HD67 2058 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 TECTAO75443 2155 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 SHISA7A6NL88 538 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 RNF225M0QZC1 329 aaPredicted RBP10.34□□□□□ -0.75
YBX3-212ENST00000542002 PI15O43692 258 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 PRAMEF12O95522 483 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 GNA14O95837 355 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 CALCAP01258 141 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 CSH1P0DML2 217 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 CSH2P0DML3 217 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 SRFP11831 508 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 ACO1P21399 889 aaKnown RBP10.34□□□□□ -0.75
YBX3-212ENST00000542002 APBA1Q02410 837 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 CUL2Q13617 745 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 TAF12Q16514 161 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 HSP90AA4PQ58FG1 418 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 WDR44Q5JSH3 913 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 PPP1R26Q5T8A7 1209 aaPredicted RBP10.34□□□□□ -0.75
YBX3-212ENST00000542002 PHLDB3Q6NSJ2 640 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 FAM35AQ86V20 835 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 ARHGEF19Q8IW93 802 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 MAB21L3Q8N8X9 362 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 RIN3Q8TB24 985 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 CYFIP2Q96F07 1278 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 TNIP3Q96KP6 325 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 CNOT6LQ96LI5 555 aaKnown RBP10.34□□□□□ -0.75
YBX3-212ENST00000542002 MED10Q9BTT4 135 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 NT5C1AQ9BXI3 368 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 IMPG2Q9BZV3 1241 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 TASP1Q9H6P5 420 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 ZFP14Q9HCL3 533 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 SLC2A4RGQ9NR83 387 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 SAMSN1Q9NSI8 373 aaKnown RBP10.34□□□□□ -0.75
YBX3-212ENST00000542002 TMEM63CQ9P1W3 806 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 WNT16Q9UBV4 365 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 CCL26Q9Y258 94 aa10.34□□□□□ -0.75
YBX3-212ENST00000542002 C2orf78A6NCI8 922 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 HEPACAM2A8MVW5 462 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 HHLA1C9JL84 531 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 TRIM66O15016 1216 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 AP1G2O75843 785 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 FGF19O95750 216 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 AFPP02771 609 aaKnown RBP10.33□□□□□ -0.76
YBX3-212ENST00000542002 ERCC5P28715 1186 aaPredicted RBP10.33□□□□□ -0.76
YBX3-212ENST00000542002 ADORA2BP29275 332 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 WEE1P30291 646 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 CDC25CP30307 473 aa10.33□□□□□ -0.76
YBX3-212ENST00000542002 VCPP55072 806 aaKnown RBP10.33□□□□□ -0.76
YBX3-212ENST00000542002 MAP3K7CLP57077 242 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms