RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 SEPT10Q9P0V9 454 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 SLC17A6Q9P2U8 582 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 UGT1A9O60656 530 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 LDHAP00338 332 aaKnown RBP14.21□□□□□ -0.13
PTPN1-202ENST00000541713 TBXAS1P24557 533 aaPredicted RBP14.21□□□□□ -0.13
PTPN1-202ENST00000541713 KLRC2P26717 231 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 EPHB2P29323 1055 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 ARL2P36404 184 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 ELK3P41970 407 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 VCPP55072 806 aaKnown RBP14.21□□□□□ -0.13
PTPN1-202ENST00000541713 PLCB4Q15147 1175 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 JADE1Q6IE81 842 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 HACE1Q8IYU2 909 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 C12orf50Q8NA57 414 aaPredicted RBP14.21□□□□□ -0.13
PTPN1-202ENST00000541713 DTX3LQ8TDB6 740 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 NLRP7Q8WX94 980 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 FAF2Q96CS3 445 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 LRRC37BQ96QE4 947 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 PAFAH2Q99487 392 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 UGT1A7Q9HAW7 530 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 UGT1A10Q9HAW8 530 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 UGT1A8Q9HAW9 530 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 FBXO6Q9NRD1 293 aaPredicted RBP14.21□□□□□ -0.13
PTPN1-202ENST00000541713 KLK14Q9P0G3 267 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 SYNPO2Q9UMS6 1093 aa14.21□□□□□ -0.13
PTPN1-202ENST00000541713 LRRC37AA6NMS7 1700 aa14.21□□□□□ -0.14
PTPN1-202ENST00000541713 KCNN4O15554 427 aa14.21□□□□□ -0.14
PTPN1-202ENST00000541713 CDKN2BP42772 138 aa14.21□□□□□ -0.14
PTPN1-202ENST00000541713 RCN2Q14257 317 aa14.21□□□□□ -0.14
PTPN1-202ENST00000541713 SPARCL1Q14515 664 aa14.21□□□□□ -0.14
PTPN1-202ENST00000541713 STAT4Q14765 748 aa14.21□□□□□ -0.14
PTPN1-202ENST00000541713 ACOT1Q86TX2 421 aa14.21□□□□□ -0.14
PTPN1-202ENST00000541713 CCDC110Q8TBZ0 833 aa14.21□□□□□ -0.14
PTPN1-202ENST00000541713 MAML1Q92585 1016 aa14.21□□□□□ -0.14
PTPN1-202ENST00000541713 C17orf75Q9HAS0 396 aa14.21□□□□□ -0.14
PTPN1-202ENST00000541713 CACNG4Q9UBN1 327 aa14.21□□□□□ -0.14
PTPN1-202ENST00000541713 ZNF831Q5JPB2 1677 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 OGTO15294 1046 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 MSCO60682 206 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 YARSP54577 528 aaKnown RBP14.2□□□□□ -0.14
PTPN1-202ENST00000541713 GPX6P59796 221 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 RFWD2Q8NHY2 731 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 CENPTQ96BT3 561 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 ACO2Q99798 780 aaKnown RBP14.2□□□□□ -0.14
PTPN1-202ENST00000541713 MAFBQ9Y5Q3 323 aaPredicted RBP14.2□□□□□ -0.14
PTPN1-202ENST00000541713 CSADQ9Y600 493 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 MAPK13O15264 365 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 CALB1P05937 261 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 ADORA2BP29275 332 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 TAF1BQ53T94 588 aaPredicted RBP14.2□□□□□ -0.14
PTPN1-202ENST00000541713 ZCCHC23Q6ZST2 131 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 TRABD2AQ86V40 505 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 BRSK2Q8IWQ3 736 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 UNC5BQ8IZJ1 945 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 ZCCHC9Q8N567 271 aaKnown RBP14.2□□□□□ -0.14
PTPN1-202ENST00000541713 ALLCQ8N6M5 410 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 SNX9Q9Y5X1 595 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 E5RJQ4 531 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 PDHA1P08559 390 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 TFE3P19532 575 aaPredicted RBP14.2□□□□□ -0.14
PTPN1-202ENST00000541713 GCAP28676 217 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 ABCG1P45844 678 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 C1QBPQ07021 282 aaKnown RBP14.2□□□□□ -0.14
PTPN1-202ENST00000541713 FAM160B1Q5W0V3 765 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 PHF13Q86YI8 300 aaPredicted RBP14.2□□□□□ -0.14
PTPN1-202ENST00000541713 CPT1BQ92523 772 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 ZBED3Q96IU2 234 aaPredicted RBP14.2□□□□□ -0.14
PTPN1-202ENST00000541713 SPATC1LQ9H0A9 340 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 CXorf56Q9H5V9 222 aa14.2□□□□□ -0.14
PTPN1-202ENST00000541713 MAFGO15525 162 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 ENTPD5O75356 428 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 NPTXRO95502 500 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 MT-ND3P03897 115 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 PYGBP11216 843 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 MAN1A1P33908 653 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 BAG6P46379 1132 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 FAAP100Q0VG06 881 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 XRCC4Q13426 336 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 HADHQ16836 314 aaKnown RBP14.19□□□□□ -0.14
PTPN1-202ENST00000541713 KIZQ2M2Z5 673 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 KBTBD12Q3ZCT8 623 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 MFSD5Q6N075 450 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 CES3Q6UWW8 571 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 AGR3Q8TD06 166 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 PTPRN2Q92932 1015 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 CYB561D2O14569 222 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 PPEF2O14830 753 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 STAG3L1P0CL83 205 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 BGNP21810 368 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 PRPF39Q86UA1 669 aaKnown RBP14.19□□□□□ -0.14
PTPN1-202ENST00000541713 ZNF677Q86XU0 584 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 PDIK1LQ8N165 341 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 TTC8Q8TAM2 541 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 RXFP2Q8WXD0 754 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 ELOVL4Q9GZR5 314 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 IQCGQ9H095 443 aaKnown RBP14.19□□□□□ -0.14
PTPN1-202ENST00000541713 C10orf71Q711Q0 1435 aa14.19□□□□□ -0.14
PTPN1-202ENST00000541713 KBTBD13C9JR72 458 aa14.18□□□□□ -0.14
PTPN1-202ENST00000541713 MCF2LO15068 1137 aa14.18□□□□□ -0.14
PTPN1-202ENST00000541713 MICAL2O94851 1124 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms