RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 ZMYM5Q9UJ78 669 aa15.14■□□□□ 0.01
USP28-209ENST00000540925 HEPACAM2A8MVW5 462 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 A8MXQ7 604 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 EPB41P11171 864 aaKnown RBP15.13■□□□□ 0.01
USP28-209ENST00000540925 ANP32AP39687 249 aaKnown RBP15.13■□□□□ 0.01
USP28-209ENST00000540925 PPP1R2P41236 205 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 PIK3CAP42336 1068 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 NOP14P78316 857 aaKnown RBP15.13■□□□□ 0.01
USP28-209ENST00000540925 PRKCQQ04759 706 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 GRM2Q14416 872 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 MLF2Q15773 248 aaPredicted RBP15.13■□□□□ 0.01
USP28-209ENST00000540925 SLC44A4Q53GD3 710 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 GPR158Q5T848 1215 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 KRT39Q6A163 491 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 TTI2Q6NXR4 508 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 SCARA5Q6ZMJ2 495 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 ZNF687Q8N1G0 1237 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 CRYBG2Q8N1P7 616 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 SEMA4DQ92854 862 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 DNASE1L2Q92874 299 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 C8orf48Q96LL4 319 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 TSG101Q99816 390 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 TRMT61BQ9BVS5 477 aaKnown RBP15.13■□□□□ 0.01
USP28-209ENST00000540925 MFSD1Q9H3U5 465 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 SLITRK6Q9H5Y7 841 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 TBC1D17Q9HA65 648 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 HMGXB4Q9UGU5 601 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 COQ4Q9Y3A0 265 aa15.13■□□□□ 0.01
USP28-209ENST00000540925 PSMA7O14818 248 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 GALR2O43603 387 aaPredicted RBP15.12■□□□□ 0.01
USP28-209ENST00000540925 P4HA1P13674 534 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 DDX6P26196 483 aaKnown RBP eCLIP15.12■□□□□ 0.01
USP28-209ENST00000540925 CYP27A1Q02318 531 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 NHLH1Q02575 133 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 ARHGAP15Q53QZ3 475 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 ISM2Q6H9L7 571 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 MON1AQ86VX9 555 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 UNC93AQ86WB7 457 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 CMTM8Q8IZV2 173 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 FUKQ8N0W3 1084 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 FLCNQ8NFG4 579 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 SLC35C1Q96A29 364 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 FAXDC2Q96IV6 333 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 ZNF518BQ9C0D4 1074 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 ELOVL4Q9GZR5 314 aa15.12■□□□□ 0.01
USP28-209ENST00000540925 UXTQ9UBK9 157 aaPredicted RBP15.12■□□□□ 0.01
USP28-209ENST00000540925 ANAPC1Q9H1A4 1944 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 F8VP50 259 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 CLDN5O00501 218 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 TRIM66O15016 1216 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 MXI1P50539 228 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 NDST1P52848 882 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 USP46P62068 366 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 STIM1Q13586 685 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 TAF12Q16514 161 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 CBWD6Q4V339 395 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 CBWD3Q5JTY5 395 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 CBWD5Q5RIA9 395 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 SCN4BQ8IWT1 228 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 CCDC105Q8IYK2 499 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 FBXL13Q8NEE6 735 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 WHAMMQ8TF30 809 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 SHDQ96IW2 340 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 TNIP3Q96KP6 325 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 CEP63Q96MT8 703 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 GCNAQ96QF7 691 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 TWNKQ96RR1 684 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 NIF3L1Q9GZT8 377 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 CYP3A43Q9HB55 503 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 KIAA1468Q9P260 1216 aa15.11■□□□□ 0.01
USP28-209ENST00000540925 MAGED2Q9UNF1 606 aaPredicted RBP15.11■□□□□ 0.01
USP28-209ENST00000540925 KANSL1LA0AUZ9 987 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 BIN1O00499 593 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 TNFRSF10BO14763 440 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 PMM2O15305 246 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 CHADO15335 359 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 STX10O60499 249 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 GLULP15104 373 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 GDI1P31150 447 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 GRIK1P39086 918 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 MLLT6P55198 1093 aaPredicted RBP15.1■□□□□ 0.01
USP28-209ENST00000540925 ZNF268Q14587 947 aaPredicted RBP15.1■□□□□ 0.01
USP28-209ENST00000540925 TXNDC8Q6A555 127 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 DENND5BQ6ZUT9 1274 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 FRMD5Q7Z6J6 570 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 FILIP1Q7Z7B0 1213 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 ACOT1Q86TX2 421 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 FAM35AQ86V20 835 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 TRIML1Q8N9V2 468 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 PJA1Q8NG27 643 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 RIN3Q8TB24 985 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 IRF7Q92985 503 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 USP13Q92995 863 aaPredicted RBP15.1■□□□□ 0.01
USP28-209ENST00000540925 SLC22A12Q96S37 553 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 OSBPL6Q9BZF3 934 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 FOXQ1Q9C009 403 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 BRD9Q9H8M2 597 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 HEBP1Q9NRV9 189 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 RAB20Q9NX57 234 aa15.1■□□□□ 0.01
USP28-209ENST00000540925 IL37Q9NZH6 218 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms