RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SP100P23497 879 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-203ENST00000540357 CIAPIN1Q6FI81 312 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 CYP2W1Q8TAV3 490 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 SEC14L1Q92503 715 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 MPP4Q96JB8 637 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 CNBD2Q96M20 576 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 MED10Q9BTT4 135 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 RHBDL2Q9NX52 303 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 ANPEPP15144 967 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 PDGFRAP16234 1089 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 RGS2P41220 211 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 MARK2Q7KZI7 788 aaKnown RBP13.55□□□□□ -0.24
DNMT1-203ENST00000540357 CLNKQ7Z7G1 428 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 ACTL9Q8TC94 416 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 THAP11Q96EK4 314 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 PHACTR1Q9C0D0 580 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 JPH1Q9HDC5 661 aaPredicted RBP13.55□□□□□ -0.24
DNMT1-203ENST00000540357 TOPORSQ9NS56 1045 aaPredicted RBP13.55□□□□□ -0.24
DNMT1-203ENST00000540357 THAP1Q9NVV9 213 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 ARMCX1Q9P291 453 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 ALOX15BO15296 676 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 ATP6V1B1P15313 513 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 HDAC4P56524 1084 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 OCA2Q04671 838 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 ZNF568Q3ZCX4 644 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 MFSD7Q6UXD7 560 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 C4orf19Q8IY42 314 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 KAT5Q92993 513 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 KIFC3Q9BVG8 833 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 MRPL1Q9BYD6 325 aaKnown RBP13.55□□□□□ -0.24
DNMT1-203ENST00000540357 STX18Q9P2W9 335 aaKnown RBP13.55□□□□□ -0.24
DNMT1-203ENST00000540357 DNAJC16Q9Y2G8 782 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 SPATA31A1Q5TZJ5 1347 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 RNF103-CHMP3A0A140T963 221 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 MEIS2O14770 477 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 FAM200BP0CF97 657 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 LRRC38Q5VT99 294 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 VSTM1Q6UX27 236 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 ECSITQ9BQ95 431 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 GPRC5CQ9NQ84 441 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 GTSE1Q9NYZ3 720 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 USP21Q9UK80 565 aa13.55□□□□□ -0.24
DNMT1-203ENST00000540357 SMIM31A0A1B0GVY4 71 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 GSC2O15499 205 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 H2AFYO75367 372 aaKnown RBP13.54□□□□□ -0.24
DNMT1-203ENST00000540357 TPBGLP0DKB5 382 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 ENO3P13929 434 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-203ENST00000540357 CYP4A22Q5TCH4 519 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 STRIP1Q5VSL9 837 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 GALNT4Q8N4A0 578 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 ZC3H15Q8WU90 426 aaKnown RBP13.54□□□□□ -0.24
DNMT1-203ENST00000540357 SSU72Q9NP77 194 aaKnown RBP13.54□□□□□ -0.24
DNMT1-203ENST00000540357 KCNQ5Q9NR82 932 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 ELK3P41970 407 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 TTLL12Q14166 644 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-203ENST00000540357 CCDC92Q53HC0 331 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-203ENST00000540357 C15orf52Q6ZUT6 534 aaKnown RBP13.54□□□□□ -0.24
DNMT1-203ENST00000540357 TDRPQ86YL5 185 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 FAM81AQ8TBF8 368 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 CLMNQ96JQ2 1002 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 DHX35Q9H5Z1 703 aaKnown RBP13.54□□□□□ -0.24
DNMT1-203ENST00000540357 PCDHA2Q9Y5H9 948 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 SNHG28P0DPA3 235 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 SPRP35270 261 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-203ENST00000540357 TKFCQ3LXA3 575 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 XRRA1Q6P2D8 792 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 ZNF570Q96NI8 536 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 DENND2DQ9H6A0 471 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-203ENST00000540357 MAFGO15525 162 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 VIL1P09327 827 aaKnown RBP13.54□□□□□ -0.24
DNMT1-203ENST00000540357 GPD1P21695 349 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 XIAPP98170 497 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 OCRLQ01968 901 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 EMC2Q15006 297 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 AAGABQ6PD74 315 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 CCNJLQ8IV13 435 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 SLITRK1Q96PX8 696 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 SNX25Q9H3E2 840 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 RNF146Q9NTX7 359 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 CDYLQ9Y232 598 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 GAKO14976 1311 aa13.54□□□□□ -0.24
DNMT1-203ENST00000540357 PSMD10O75832 226 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 STILQ15468 1287 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 STXBP2Q15833 593 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 DCAF12L1Q5VU92 463 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 CCNYL1Q8N7R7 359 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 C7orf31Q8N865 590 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 ANKRD63C9JTQ0 380 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 TNFAIP8O95379 198 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 ITGAVP06756 1048 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 PAMP19021 973 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 IL10P22301 178 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 ECHS1P30084 290 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 RARRES1P49788 294 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 NUDT2P50583 147 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 SESN2P58004 480 aaPredicted RBP13.53□□□□□ -0.24
DNMT1-203ENST00000540357 TBL3Q12788 808 aaKnown RBP13.53□□□□□ -0.24
DNMT1-203ENST00000540357 KRT72Q14CN4 511 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 SLC44A4Q53GD3 710 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms