RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 F8VP50 259 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 PI15O43692 258 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 P4HA1P13674 534 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 AVPR2P30518 371 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 GRIK1P39086 918 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 PPP1R2P41236 205 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 PAK1Q13153 545 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 FBXL13Q8NEE6 735 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 MYRFLQ96LU7 910 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 IPO9Q96P70 1041 aaKnown RBP16.04■□□□□ 0.16
UBE3B-212ENST00000540230 MED15Q96RN5 788 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 SLC46A2Q9BY10 475 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 IMPG2Q9BZV3 1241 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 GPR88Q9GZN0 384 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 NIF3L1Q9GZT8 377 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 MFSD1Q9H3U5 465 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 ARHGEF3Q9NR81 526 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 RAB20Q9NX57 234 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 ARMCX3Q9UH62 379 aaPredicted RBP16.04■□□□□ 0.16
UBE3B-212ENST00000540230 HCN4Q9Y3Q4 1203 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 TICRRQ7Z2Z1 1910 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 MUC6Q6W4X9 2439 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 FGF19O95750 216 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 CCDC130P13994 396 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 TXNDC8Q6A555 127 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 FAM35AQ86V20 835 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 C12orf29Q8N999 325 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 TRIML1Q8N9V2 468 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 WHAMMQ8TF30 809 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 TATDN2Q93075 761 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 TRMT2BQ96GJ1 504 aaKnown RBP16.04■□□□□ 0.16
UBE3B-212ENST00000540230 CEP63Q96MT8 703 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 GCNAQ96QF7 691 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 ARID3AQ99856 593 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 TASP1Q9H6P5 420 aa16.04■□□□□ 0.16
UBE3B-212ENST00000540230 CD58P19256 250 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 INCA1Q0VD86 236 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 ARHGAP15Q53QZ3 475 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 FOXR2Q6PJQ5 311 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 FUKQ8N0W3 1084 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 MAB21L3Q8N8X9 362 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 RIN3Q8TB24 985 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 TNIP3Q96KP6 325 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 SPATA17Q96L03 361 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 KCNK16Q96T55 309 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 ELOVL4Q9GZR5 314 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 FAM49BQ9NUQ9 324 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 COQ4Q9Y3A0 265 aa16.03■□□□□ 0.16
UBE3B-212ENST00000540230 MYO15AQ9UKN7 3530 aa16.02■□□□□ 0.16
UBE3B-212ENST00000540230 KIF26AQ9ULI4 1882 aaPredicted RBP16.02■□□□□ 0.16
UBE3B-212ENST00000540230 MYH10P35580 1976 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 BICDL2A1A5D9 508 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 SHISA7A6NL88 538 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 TRIM66O15016 1216 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 PSMC3P17980 439 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 GDI1P31150 447 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 CCDC40Q4G0X9 1142 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 ASTLQ6HA08 431 aaPredicted RBP16.02■□□□□ 0.15
UBE3B-212ENST00000540230 DENND5BQ6ZUT9 1274 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 FRMD5Q7Z6J6 570 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 UNC93AQ86WB7 457 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 MFSD6LQ8IWD5 586 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 CRYBG2Q8N1P7 616 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 PRSS33Q8NF86 280 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 C8orf48Q96LL4 319 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 SLC22A12Q96S37 553 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 MED10Q9BTT4 135 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 TRMT61BQ9BVS5 477 aaKnown RBP16.02■□□□□ 0.15
UBE3B-212ENST00000540230 TBC1D17Q9HA65 648 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 HEBP1Q9NRV9 189 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 CCL26Q9Y258 94 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 DMDP11532 3685 aa16.02■□□□□ 0.15
UBE3B-212ENST00000540230 ARNTLO00327 626 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 STX10O60499 249 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 CILPO75339 1184 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 BEST1O76090 585 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 AOC1P19801 751 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 CD72P21854 359 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 ANXA13P27216 316 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 FMO5P49326 533 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 MLF2Q15773 248 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-212ENST00000540230 SLC44A4Q53GD3 710 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 ZNF394Q53GI3 561 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 CMTM8Q8IZV2 173 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 ZMIZ2Q8NF64 920 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 GPT2Q8TD30 523 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 SLC2A14Q8TDB8 520 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 DEPDC1BQ8WUY9 529 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 TTLL2Q9BWV7 592 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 SRRTQ9BXP5 876 aaKnown RBP16.01■□□□□ 0.15
UBE3B-212ENST00000540230 FOXQ1Q9C009 403 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 BRD9Q9H8M2 597 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 CYP3A43Q9HB55 503 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 METTL14Q9HCE5 456 aaKnown RBP16.01■□□□□ 0.15
UBE3B-212ENST00000540230 KRT82Q9NSB4 513 aa16.01■□□□□ 0.15
UBE3B-212ENST00000540230 UXTQ9UBK9 157 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-212ENST00000540230 PATJQ8NI35 1801 aa16■□□□□ 0.15
UBE3B-212ENST00000540230 C2orf78A6NCI8 922 aa16■□□□□ 0.15
UBE3B-212ENST00000540230 CLCN5P51795 746 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms