RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CLPTM1O96005 669 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 FOSP01100 380 aaPredicted RBP9.09□□□□□ -0.95
DDB1-217ENST00000540166 ITIH2P19823 946 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 ANXA13P27216 316 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 CAV1Q03135 178 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 KDSRQ06136 332 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 PPP2R5CQ13362 524 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 LRRC26Q2I0M4 334 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 MAP3K21Q5TCX8 1036 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 GJB7Q6PEY0 223 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 TRIM59Q8IWR1 403 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 FAM186BQ8IYM0 893 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 C17orf50Q8WW18 174 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 C1orf54Q8WWF1 131 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 ATP6V0A1Q93050 837 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 SNF8Q96H20 258 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 ADAM33Q9BZ11 813 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 UNC45AQ9H3U1 944 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 KCNMB3Q9NPA1 279 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 STX18Q9P2W9 335 aaKnown RBP9.09□□□□□ -0.95
DDB1-217ENST00000540166 CHKBQ9Y259 395 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 A6NJR5 290 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 A8MXQ7 604 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 hCG_1984214I3L0E3 225 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 TTC4O95801 387 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 TAC1P20366 129 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 CTNNA2P26232 953 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 THPOP40225 353 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 CTTNQ14247 550 aaKnown RBP9.09□□□□□ -0.95
DDB1-217ENST00000540166 TRIP10Q15642 601 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 SLC45A4Q5BKX6 768 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 RABGAP1LQ5R372 815 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 ANO5Q75V66 913 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 NANOGNBQ7Z5D8 188 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 ZNF713Q8N859 430 aaPredicted RBP9.09□□□□□ -0.95
DDB1-217ENST00000540166 TMEM109Q9BVC6 243 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 ADAM7Q9H2U9 754 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 WDR37Q9Y2I8 494 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 ALG6Q9Y672 507 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 MYH13Q9UKX3 1938 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 PDLIM1O00151 329 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 PGM3O95394 542 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 EYA4O95677 639 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 NR3C1P04150 777 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 ENO1P06733 434 aaKnown RBP9.09□□□□□ -0.95
DDB1-217ENST00000540166 CYP2C18P33260 490 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 COILP38432 576 aaPredicted RBP9.09□□□□□ -0.95
DDB1-217ENST00000540166 NPEPPSP55786 919 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 PPIDQ08752 370 aaKnown RBP9.09□□□□□ -0.95
DDB1-217ENST00000540166 ODR4Q5SWX8 454 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 DSTYKQ6XUX3 929 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 RASGEF1CQ8N431 466 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 ZBTB8BQ8NAP8 495 aaPredicted RBP9.09□□□□□ -0.95
DDB1-217ENST00000540166 OSBPL8Q9BZF1 889 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 SAYSD1Q9NPB0 183 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 SENP1Q9P0U3 644 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 DNAJC12Q9UKB3 198 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 ZNF148Q9UQR1 794 aa9.09□□□□□ -0.95
DDB1-217ENST00000540166 MYO5AQ9Y4I1 1855 aaKnown RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 A0A0A6YYK5 440 aaPredicted RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 BTNL10A8MVZ5 291 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 TBX10O75333 385 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 DLATP10515 647 aaKnown RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 CYP2C9P11712 490 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 EPHB1P54762 984 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 BPIFB4P59827 614 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 PSMC6P62333 389 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 ARHGAP4P98171 946 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 CCDC85BQ15834 202 aaPredicted RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 LRRC8BQ6P9F7 803 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 C1orf228Q6PIY5 440 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 ZBTB33Q86T24 672 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 SLFN12Q8IYM2 578 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 TUBGCP5Q96RT8 1024 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 YME1L1Q96TA2 773 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 ECSITQ9BQ95 431 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 ALG13Q9NP73 1137 aaKnown RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 ITGB1BP2Q9UKP3 347 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 BAZ2AQ9UIF9 1905 aaKnown RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 PSMC2P35998 433 aaKnown RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 DUSP28Q4G0W2 176 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 C1QTNF12Q5T7M4 302 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 PPP2R2DQ66LE6 453 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 RFWD3Q6PCD5 774 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 LVRNQ6Q4G3 990 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 ZNF467Q7Z7K2 595 aaPredicted RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 SCFD1Q8WVM8 642 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 DGCR14Q96DF8 476 aaKnown RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 DNAJC1Q96KC8 554 aaKnown RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 LRRC4CQ9HCJ2 640 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 R3HDM2Q9Y2K5 976 aaKnown RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 NR2E1Q9Y466 385 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 FOXO6A8MYZ6 492 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 TMEM253P0C7T8 217 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 PIK3CAP42336 1068 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 DRAP1Q14919 205 aaPredicted RBP9.08□□□□□ -0.96
DDB1-217ENST00000540166 ZNF792Q3KQV3 632 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 ACSBG2Q5FVE4 666 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 MDH1BQ5I0G3 518 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms