RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ELOVL4Q9GZR5 314 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 SLITRK6Q9H5Y7 841 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 CILPO75339 1184 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 ECI2O75521 394 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 FGF19O95750 216 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 GNA14O95837 355 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 CFHP08603 1231 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 SRFP11831 508 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 CCDC130P13994 396 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 CDC25CP30307 473 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 USP46P62068 366 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 GPC5P78333 572 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 WDR44Q5JSH3 913 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 BMP8AQ7Z5Y6 402 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 FAM35AQ86V20 835 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 ELSPBP1Q96BH3 223 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 TRMT2BQ96GJ1 504 aaKnown RBP19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 SPATA17Q96L03 361 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 C8orf48Q96LL4 319 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 KCNK16Q96T55 309 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 FAM49BQ9NUQ9 324 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 GREB1Q4ZG55 1949 aa19.46■□□□□ 0.71
SNRPA1-203ENST00000540017 PMM2O15305 246 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 KCNH2Q12809 1159 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 LRMPQ12912 555 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 IER5LQ5T953 404 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 LMO3Q8TAP4 145 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 PBXIP1Q96AQ6 731 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 FAXDC2Q96IV6 333 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 CNOT6LQ96LI5 555 aaKnown RBP19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 MED10Q9BTT4 135 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 NT5C1AQ9BXI3 368 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 SLC46A2Q9BY10 475 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 GPR88Q9GZN0 384 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 TRPV4Q9HBA0 871 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 ZFP14Q9HCL3 533 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 OBSL1O75147 1896 aa19.45■□□□□ 0.7
SNRPA1-203ENST00000540017 TRIM66O15016 1216 aa19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 GRM2Q14416 872 aa19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 ZNF394Q53GI3 561 aa19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 ARHGAP15Q53QZ3 475 aa19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 VITQ6UXI7 678 aa19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 ARID3BQ8IVW6 561 aaPredicted RBP19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 SLC2A14Q8TDB8 520 aa19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 LRRC3BQ96PB8 259 aa19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 TASP1Q9H6P5 420 aa19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 SLC2A4RGQ9NR83 387 aa19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 CISHQ9NSE2 258 aa19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 DENND4CQ5VZ89 1909 aa19.44■□□□□ 0.7
SNRPA1-203ENST00000540017 KRBA1A5PL33 1030 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 BEST1O76090 585 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 PRAMEF12O95522 483 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 FGFR1OPO95684 399 aaKnown RBP19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 CCDC192P0DO97 292 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 ANXA13P27216 316 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 TXNDC8Q6A555 127 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 DENND5BQ6ZUT9 1274 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 MAB21L3Q8N8X9 362 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 ZMIZ2Q8NF64 920 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 GCNAQ96QF7 691 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 SMOQ99835 787 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 TTLL2Q9BWV7 592 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 SMG9Q9H0W8 520 aaKnown RBP19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 KRT82Q9NSB4 513 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 UXTQ9UBK9 157 aaPredicted RBP19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 RAPGEFL1Q9UHV5 662 aa19.43■□□□□ 0.7
SNRPA1-203ENST00000540017 HEPACAM2A8MVW5 462 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 P4HA2O15460 535 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 AP1G2O75843 785 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 AFPP02771 609 aaKnown RBP19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 NPR3P17342 541 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 ERCC5P28715 1186 aaPredicted RBP19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 ADORA2BP29275 332 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 RAD23BP54727 409 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 CUL2Q13617 745 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 CREBRFQ8IUR6 639 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 SIX5Q8N196 739 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 UBR7Q8N806 425 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 SLC4A11Q8NBS3 891 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 KAT5Q92993 513 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 CYFIP2Q96F07 1278 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 SMARCD1Q96GM5 515 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 CEP295NLQ96MC4 621 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 HNRNPABQ99729 332 aaKnown RBP19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 WNT16Q9UBV4 365 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 FBXL21Q9UKT6 434 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 CA14Q9ULX7 337 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 COL4A3Q01955 1670 aa19.42■□□□□ 0.7
SNRPA1-203ENST00000540017 TNFRSF10BO14763 440 aa19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 MBD3O95983 291 aa19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 PPP1R26Q5T8A7 1209 aaPredicted RBP19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 CMTM8Q8IZV2 173 aa19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 FBXL6Q8N531 539 aa19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 EHBP1Q8NDI1 1231 aa19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 SCAMP5Q8TAC9 235 aa19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 SLC22A12Q96S37 553 aa19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 CSNK1G1Q9HCP0 422 aa19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 DMAP1Q9NPF5 467 aaPredicted RBP19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 TMEM63CQ9P1W3 806 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms