RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 SYDE2Q5VT97 1194 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 C1orf146Q5VVC0 180 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 TTBK2Q6IQ55 1244 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 ADGRD1Q6QNK2 874 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 TXNRD3Q86VQ6 643 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 PDSS2Q86YH6 399 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 TRIM42Q8IWZ5 723 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 C12orf56Q8IXR9 622 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 ZBED8Q8IZ13 594 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 BANPQ8N9N5 519 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 RDH13Q8NBN7 331 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 EXD1Q8NHP7 514 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 LENG9Q96B70 501 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 FIZ1Q96SL8 496 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 C1orf21Q9H246 121 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 IKZF4Q9H2S9 585 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 C17orf75Q9HAS0 396 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 FBXO6Q9NRD1 293 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-209ENST00000538654 MKS1Q9NXB0 559 aa9.45□□□□□ -0.9
SNHG1-209ENST00000538654 MOXD2PA6NHM9 499 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 ENPP3O14638 875 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 KLF11O14901 512 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 MSH4O15457 936 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 RNASEH1O60930 286 aaKnown RBP9.44□□□□□ -0.9
SNHG1-209ENST00000538654 KATNA1O75449 491 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 PROSCO94903 275 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 UQCRBP14927 111 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 GCLMP48507 274 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 CDK18Q07002 472 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 PPP3CAQ08209 521 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 PDIA2Q13087 525 aaKnown RBP9.44□□□□□ -0.9
SNHG1-209ENST00000538654 QRICH1Q2TAL8 776 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 HSP90AA5PQ58FG0 334 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 DPP8Q6V1X1 898 aaPredicted RBP9.44□□□□□ -0.9
SNHG1-209ENST00000538654 ULK2Q8IYT8 1036 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 PPM1KQ8N3J5 372 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 ATP11CQ8NB49 1132 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 MTBPQ96DY7 904 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 HSD17B14Q9BPX1 270 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 HERPUD2Q9BSE4 406 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 HEMGNQ9BXL5 484 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 PPP2R3BQ9Y5P8 575 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 SBF2Q86WG5 1849 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 ZNFX1Q9P2E3 1918 aaKnown RBP9.44□□□□□ -0.9
SNHG1-209ENST00000538654 H3BRJ5 948 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 MEIS2O14770 477 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 AP1G1O43747 822 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 STRNO43815 780 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 CSDE1O75534 798 aaKnown RBP9.44□□□□□ -0.9
SNHG1-209ENST00000538654 MYL2P10916 166 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 TSHRP16473 764 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 IL4RP24394 825 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 SLC16A2P36021 539 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 ARL4CP56559 192 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 SNRPFP62306 86 aaKnown RBP9.44□□□□□ -0.9
SNHG1-209ENST00000538654 B3GNT6Q6ZMB0 384 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 UBE2Q1Q7Z7E8 422 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 FAM172AQ8WUF8 416 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 FAM163AQ96GL9 167 aaPredicted RBP9.44□□□□□ -0.9
SNHG1-209ENST00000538654 MPP4Q96JB8 637 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 PANX3Q96QZ0 392 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 NACC1Q96RE7 527 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 TTC1Q99614 292 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 DHRS4Q9BTZ2 278 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 TIMMDC1Q9NPL8 285 aa9.44□□□□□ -0.9
SNHG1-209ENST00000538654 DRG1Q9Y295 367 aaKnown RBP9.44□□□□□ -0.9
SNHG1-209ENST00000538654 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.44□□□□□ -0.9
SNHG1-209ENST00000538654 MYH14Q7Z406 1995 aaKnown RBP9.44□□□□□ -0.9
SNHG1-209ENST00000538654 CAPN14A8MX76 684 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 PLSCR1O15162 318 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 LIASO43766 372 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 LPXNO60711 386 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 DHRS4L1P0CG22 281 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 FDX1P10109 184 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 AKR1B1P15121 316 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 MASP1P48740 699 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 ARSEP51690 589 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 DLG4P78352 724 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 GPS1Q13098 491 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 DHDDSQ86SQ9 333 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 KSR1Q8IVT5 923 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 TPH2Q8IWU9 490 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 HAUS1Q96CS2 278 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 KREMEN1Q96MU8 473 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 LBHD1Q9BQE6 289 aaPredicted RBP9.43□□□□□ -0.9
SNHG1-209ENST00000538654 STRA6Q9BX79 667 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 KLHL4Q9C0H6 718 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 WWP1Q9H0M0 922 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 EBF3Q9H4W6 596 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 BCAS3Q9H6U6 928 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 RABGEF1Q9UJ41 708 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 PLA2G4CQ9UP65 541 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 ZNF148Q9UQR1 794 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 RBBP6Q7Z6E9 1792 aaKnown RBP9.43□□□□□ -0.9
SNHG1-209ENST00000538654 LOC102724428A0A0B4J2F2 783 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 IQANK1A0A1B0GTG1 560 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 A0A1W2PRQ8 180 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 FAM86B1E9PN63 330 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 I3L4J1 428 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 HNRNPRO43390 633 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms