RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CD300LGQ6UXG3 332 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MMS22LQ6ZRQ5 1243 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PHLDB2Q86SQ0 1253 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SIX6OS1Q8N1H7 587 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ANKRD52Q8NB46 1076 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 KLHL23Q8NBE8 558 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DDX1Q92499 740 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZNF592Q92610 1267 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 GOLGA1Q92805 767 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MYLPFQ96A32 169 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 C18orf8Q96DM3 657 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SMARCD1Q96GM5 515 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PPP1R13BQ96KQ4 1090 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 HNRNPABQ99729 332 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SELENOOQ9BVL4 669 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 HERC2P3Q9BVR0 1158 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MRPL47Q9HD33 250 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 KRT82Q9NSB4 513 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CNOT8Q9UFF9 292 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PCDHA11Q9Y5I1 949 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MYH10P35580 1976 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 LCA5LO95447 670 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CYP1A1P04798 512 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 OR4Q2P0C623 313 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 LCP1P13796 627 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 BDNFP23560 247 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 OR1D2P34982 312 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SSR1P43307 286 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MAP3K7CLP57077 242 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 GNG11P61952 73 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 NOMO3P69849 1222 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PDE4CQ08493 712 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SMARCB1Q12824 385 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MGAT5BQ3V5L5 792 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZNF569Q5MCW4 686 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DNAJC24Q6P3W2 148 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TAS1R1Q7RTX1 841 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 LIMS2Q7Z4I7 341 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 FAM35AQ86V20 835 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RHOT2Q8IXI1 618 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MCOLN2Q8IZK6 566 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 VCPIP1Q96JH7 1222 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SAMD11Q96NU1 681 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PGLYRP2Q96PD5 576 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 C11orf84Q9BUA3 381 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PLVAPQ9BX97 442 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 EMILIN2Q9BXX0 1053 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DUSP16Q9BY84 665 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 B3GNT5Q9BYG0 378 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZCWPW1Q9H0M4 648 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SLC28A3Q9HAS3 691 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CRTAC1Q9NQ79 661 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TAS2R14Q9NYV8 317 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PAXBP1Q9Y5B6 917 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CDY1Q9Y6F8 540 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SCINQ9Y6U3 715 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 COL4A6Q14031 1691 aa11.26□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TMEM110-MUSTN1A8MSY1 372 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 KIF2AO00139 706 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PIK3R2O00459 728 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TRIM66O15016 1216 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 BUB1O43683 1085 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RB1P06400 928 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CA3P07451 260 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CFHP08603 1231 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 UNGP13051 313 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MYOGP15173 224 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 NPR3P17342 541 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RPL17P18621 184 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 KLRC2P26717 231 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RNASE9P60153 205 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RPL10AP62906 217 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PLCB3Q01970 1234 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CENPCQ03188 943 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 IFRD2Q12894 506 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RTP2Q5QGT7 225 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TMEM173Q86WV6 379 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DNAAF5Q86Y56 855 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 OR10T2Q8NGX3 314 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 C2orf15Q8WU43 125 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 BCL7CQ8WUZ0 217 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PCED1BQ96HM7 432 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CALR3Q96L12 384 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 C16orf45Q96MC5 204 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TGS1Q96RS0 853 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TMEM209Q96SK2 561 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SEPT5Q99719 369 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 NUP85Q9BW27 656 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PACSIN1Q9BY11 444 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 THAP2Q9H0W7 228 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ISCUQ9H1K1 167 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RC3H2Q9HBD1 1191 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ALG13Q9NP73 1137 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DMAP1Q9NPF5 467 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PARVAQ9NVD7 372 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TFR2Q9UP52 801 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 NLRC5Q86WI3 1866 aa11.25□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms