RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 ENGASEQ8NFI3 743 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 FAM3CQ92520 227 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 C8orf48Q96LL4 319 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 IMPG2Q9BZV3 1241 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 ELOVL4Q9GZR5 314 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 DNAI2Q9GZS0 605 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 TDP1Q9NUW8 608 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 MAPK8IP1Q9UQF2 711 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 PIAS3Q9Y6X2 628 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 NUP210Q8TEM1 1887 aaPredicted RBP22.89■■□□□ 1.25
CCDC78-215ENST00000538176 HCRTO43612 131 aa22.88■■□□□ 1.25
CCDC78-215ENST00000538176 CLSTN1O94985 981 aa22.88■■□□□ 1.25
CCDC78-215ENST00000538176 GPR15P49685 360 aa22.88■■□□□ 1.25
CCDC78-215ENST00000538176 MCCD1P59942 119 aaPredicted RBP22.88■■□□□ 1.25
CCDC78-215ENST00000538176 ZNF658Q5TYW1 1059 aaPredicted RBP22.88■■□□□ 1.25
CCDC78-215ENST00000538176 MAMSTRQ6ZN01 415 aa22.88■■□□□ 1.25
CCDC78-215ENST00000538176 B3GALNT2Q8NCR0 500 aa22.88■■□□□ 1.25
CCDC78-215ENST00000538176 FAM86C1Q9NVL1 165 aa22.88■■□□□ 1.25
CCDC78-215ENST00000538176 MIA3Q5JRA6 1907 aa22.88■■□□□ 1.25
CCDC78-215ENST00000538176 ATP8B3O60423 1300 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 AKAP3O75969 853 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 CD72P21854 359 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 TARSP26639 723 aaKnown RBP22.87■■□□□ 1.25
CCDC78-215ENST00000538176 GTF2H1P32780 548 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 KPNA1P52294 538 aaPredicted RBP22.87■■□□□ 1.25
CCDC78-215ENST00000538176 NOP14P78316 857 aaKnown RBP22.87■■□□□ 1.25
CCDC78-215ENST00000538176 DLG4P78352 724 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 MDH1BQ5I0G3 518 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 SDHAF4Q5VUM1 108 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 ZC3H14Q6PJT7 736 aaKnown RBP22.87■■□□□ 1.25
CCDC78-215ENST00000538176 UNC93AQ86WB7 457 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 RALGPS2Q86X27 583 aaPredicted RBP22.87■■□□□ 1.25
CCDC78-215ENST00000538176 FAM186BQ8IYM0 893 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 CCDC150Q8NCX0 1101 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 RSPRY1Q96DX4 576 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 FBXO4Q9UKT5 387 aa22.87■■□□□ 1.25
CCDC78-215ENST00000538176 CIZ1Q9ULV3 898 aaPredicted RBP22.87■■□□□ 1.25
CCDC78-215ENST00000538176 MTF2Q9Y483 593 aaPredicted RBP22.87■■□□□ 1.25
CCDC78-215ENST00000538176 CETN3O15182 167 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 LAMTOR5O43504 91 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 STX10O60499 249 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 VNN1O95497 513 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 ASS1P00966 412 aaKnown RBP22.86■■□□□ 1.25
CCDC78-215ENST00000538176 USP17L7P0C7H9 530 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 PPP1R2P41236 205 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 AMPD2Q01433 879 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 PNOCQ13519 176 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 ZNF528Q3MIS6 628 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 ZCWPW2Q504Y3 356 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 TXNDC8Q6A555 127 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 CC2D1AQ6P1N0 951 aaPredicted RBP22.86■■□□□ 1.25
CCDC78-215ENST00000538176 SPATA20Q8TB22 786 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 SMARCE1Q969G3 411 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 FAXDC2Q96IV6 333 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 PHOX2BQ99453 314 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 TSG101Q99816 390 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 SPATA6Q9NWH7 488 aaPredicted RBP22.86■■□□□ 1.25
CCDC78-215ENST00000538176 DENND4CQ5VZ89 1909 aa22.86■■□□□ 1.25
CCDC78-215ENST00000538176 F5P12259 2224 aa22.85■■□□□ 1.25
CCDC78-215ENST00000538176 TRAV19A0A0A6YYK7 116 aa22.85■■□□□ 1.25
CCDC78-215ENST00000538176 PRAMEF12O95522 483 aa22.85■■□□□ 1.25
CCDC78-215ENST00000538176 PPP2R5DQ14738 602 aa22.85■■□□□ 1.25
CCDC78-215ENST00000538176 NKD2Q969F2 451 aaPredicted RBP22.85■■□□□ 1.25
CCDC78-215ENST00000538176 LRRC3BQ96PB8 259 aa22.85■■□□□ 1.25
CCDC78-215ENST00000538176 TTLL2Q9BWV7 592 aa22.85■■□□□ 1.25
CCDC78-215ENST00000538176 TRPM5Q9NZQ8 1165 aa22.85■■□□□ 1.25
CCDC78-215ENST00000538176 EPB41P11171 864 aaKnown RBP22.84■■□□□ 1.25
CCDC78-215ENST00000538176 PIK3CAP42336 1068 aa22.84■■□□□ 1.25
CCDC78-215ENST00000538176 ITPRIPL2Q3MIP1 535 aa22.84■■□□□ 1.25
CCDC78-215ENST00000538176 CRYBG2Q8N1P7 616 aa22.84■■□□□ 1.25
CCDC78-215ENST00000538176 USP13Q92995 863 aaPredicted RBP22.84■■□□□ 1.25
CCDC78-215ENST00000538176 EXOC4Q96A65 974 aa22.84■■□□□ 1.25
CCDC78-215ENST00000538176 CYP3A43Q9HB55 503 aa22.84■■□□□ 1.25
CCDC78-215ENST00000538176 PCDHA5Q9Y5H7 936 aa22.84■■□□□ 1.25
CCDC78-215ENST00000538176 NCANO14594 1321 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 SHISA7A6NL88 538 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 F8VP50 259 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 GFRA3O60609 400 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 LRRN2O75325 713 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 RTN3O95197 1032 aaPredicted RBP22.83■■□□□ 1.25
CCDC78-215ENST00000538176 HLA-DRAP01903 254 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 CCNE1P24864 410 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 PRCPP42785 496 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 CDH8P55286 799 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 FKBP3Q00688 224 aaKnown RBP22.83■■□□□ 1.25
CCDC78-215ENST00000538176 FZD5Q13467 585 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 STIM1Q13586 685 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 LRRC32Q14392 662 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 CCDC142Q17RM4 750 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 C1orf220Q5T0J3 134 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 KRT39Q6A163 491 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 GPIHBP1Q8IV16 184 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 ZNF687Q8N1G0 1237 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 TTC39CQ8N584 583 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 KIAA1958Q8N8K9 716 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 SLITRK1Q96PX8 696 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 FAM83CQ9BQN1 747 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 DPEP3Q9H4B8 488 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 FAM124BQ9H5Z6 455 aaPredicted RBP22.83■■□□□ 1.25
CCDC78-215ENST00000538176 SMYD3Q9H7B4 428 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms