RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 FAM136AQ96C01 138 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 HIC2Q96JB3 615 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 MS4A4AQ96JQ5 239 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 CATSPER2Q96P56 530 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 FNBP1Q96RU3 617 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 HAPLN3Q96S86 360 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 HAUS8Q9BT25 410 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 STRA6Q9BX79 667 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 IMPG2Q9BZV3 1241 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 DNAI2Q9GZS0 605 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 KIAA1683Q9H0B3 1180 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 DENND2DQ9H6A0 471 aaPredicted RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 C11orf49Q9H6J7 331 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 ACSS3Q9H6R3 686 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 ZWILCHQ9H900 591 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 GPCPD1Q9NPB8 672 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 CYLDQ9NQC7 956 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 ANKEF1Q9NU02 776 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 MKS1Q9NXB0 559 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 EURLQ9NYK6 297 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 C6orf203Q9P0P8 240 aaPredicted RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 HAO1Q9UJM8 370 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 NOCTQ9UK39 431 aaKnown RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 VAV3Q9UKW4 847 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 MTMR7Q9Y216 660 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 CHKBQ9Y259 395 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 C2CD2Q9Y426 696 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 A0A1B0GUL6 1792 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 COL2A1P02458 1487 aaPredicted RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 ALPK3Q96L96 1907 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 EMSYQ7Z589 1322 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 TTC36A6NLP5 189 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 H3BNX3 289 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 K7ENM7 598 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 SNAP23O00161 211 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 MEIS2O14770 477 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 SLC22A2O15244 555 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 MSH4O15457 936 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 CLDN3O15551 220 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ATP9BO43861 1147 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 TYROBPO43914 113 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 FAM189A1O60320 539 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ATP9AO75110 1047 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 H2AFYO75367 372 aaKnown RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 TM7SF2O76062 418 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 SLITRK3O94933 977 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 RARBP10826 455 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ELNP15502 786 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 KRT4P19013 534 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 GRK2P25098 689 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 TARSP26639 723 aaKnown RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 CTGFP29279 349 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 PRDX6P30041 224 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 GSTT1P30711 240 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 HOXD13P35453 343 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 MAGEA8P43361 318 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 CYP2J2P51589 502 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 JAK3P52333 1124 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 PRKAA2P54646 552 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 FCGRTP55899 365 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 POLE2P56282 527 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 RHBDL3P58872 404 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 MYL6P60660 151 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ACTR3P61158 418 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 NFX1Q12986 1120 aaKnown RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 DMP1Q13316 513 aaPredicted RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 KLF1Q13351 362 aaPredicted RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 NAB1Q13506 487 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 HNRNPDQ14103 355 aaKnown RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 TFDP2Q14188 446 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 HIC1Q14526 733 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 RCN1Q15293 331 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 DLGAP5Q15398 846 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 SPRED3Q2MJR0 410 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 QRICH1Q2TAL8 776 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 CERKLQ49MI3 558 aaPredicted RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 LIN52Q52LA3 116 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 TFDP3Q5H9I0 405 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 MFSD14BQ5SR56 506 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 PCNX4Q63HM2 1172 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 OR52E8Q6IFG1 317 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ZNF449Q6P9G9 518 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 BORAQ6PGQ7 559 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ADAT2Q7Z6V5 191 aaKnown RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 MTDHQ86UE4 582 aaKnown RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 ZC3H18Q86VM9 953 aaKnown RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 PHF13Q86YI8 300 aaPredicted RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 MAP7D3Q8IWC1 876 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 SCUBE1Q8IWY4 988 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 RBM12BQ8IXT5 1001 aaKnown RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 EXOC8Q8IYI6 725 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 RNF168Q8IYW5 571 aaPredicted RBP6.09□□□□□ -1.43
CHD4-206ENST00000536999 MCOLN2Q8IZK6 566 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 KIF2BQ8N4N8 673 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ALLCQ8N6M5 410 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ANKLE1Q8NAG6 615 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 KLHL23Q8NBE8 558 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 ICA1LQ8NDH6 482 aa6.09□□□□□ -1.43
CHD4-206ENST00000536999 MCPH1Q8NEM0 835 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms