RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 TRAPPC12Q8WVT3 735 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 TBC1D20Q96BZ9 403 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 ISCA1Q9BUE6 129 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 BDH2Q9BUT1 245 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 FAM83DQ9H4H8 585 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 CXorf36Q9H7Y0 433 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 DNMT3BQ9UBC3 853 aaKnown RBP6.34□□□□□ -1.39
PRKDC-208ENST00000536710 DKK4Q9UBT3 224 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 RGS17Q9UGC6 210 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-208ENST00000536710 ST6GALNAC2Q9UJ37 374 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 HPSEQ9Y251 543 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 A0A0B4J269 797 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 MYADML2A6NDP7 307 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 AHRRA9YTQ3 701 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 ASNA1O43681 348 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 TRIAP1O43715 76 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 NCR1O76036 304 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 ITGB3P05106 788 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 CFIP05156 583 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 PECAM1P16284 738 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-208ENST00000536710 EGR1P18146 543 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 KCNA3P22001 575 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 SERPINF1P36955 418 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 TUBB3Q13509 450 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 PTK2BQ14289 1009 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 TIGD6Q17RP2 521 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 GEN1Q17RS7 908 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 PTCHD3Q3KNS1 767 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 RABL3Q5HYI8 236 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 B3GNTL1Q67FW5 361 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-208ENST00000536710 MRNIPQ6NTE8 343 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 KIAA0408Q6ZU52 694 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 GATAD2AQ86YP4 633 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 FAM9AQ8IZU1 332 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-208ENST00000536710 CHST13Q8NET6 341 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 EDAQ92838 391 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 NAP1L4Q99733 375 aaKnown RBP6.33□□□□□ -1.4
PRKDC-208ENST00000536710 ALOXE3Q9BYJ1 711 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 GBA2Q9HCG7 927 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-208ENST00000536710 NDRG4Q9ULP0 352 aaKnown RBP6.33□□□□□ -1.4
PRKDC-208ENST00000536710 CAPN11Q9UMQ6 739 aa6.33□□□□□ -1.4
PRKDC-208ENST00000536710 A0A1W2PS29 197 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 RNASET2O00584 256 aaKnown RBP6.32□□□□□ -1.4
PRKDC-208ENST00000536710 KCNQ3O43525 872 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 USP1O94782 785 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 ZFPL1O95159 310 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 YY1P25490 414 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 PRKAR1BP31321 381 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 POSTNQ15063 836 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 TMTC4Q5T4D3 741 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 SFRP4Q6FHJ7 346 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-208ENST00000536710 MICALCLQ6ZW33 695 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 Q8NA96 180 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 ZNF384Q8TF68 577 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 TMEM171Q8WVE6 324 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 RUBCNQ92622 972 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 WWC2-AS2Q96NR7 200 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 RBM15Q96T37 977 aaKnown RBP eCLIP6.32□□□□□ -1.4
PRKDC-208ENST00000536710 TMEM120AQ9BXJ8 343 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 SLC25A32Q9H2D1 315 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 ZNF768Q9H5H4 540 aaKnown RBP6.32□□□□□ -1.4
PRKDC-208ENST00000536710 ZBTB26Q9HCK0 441 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 AKIP1Q9NQ31 210 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 TMOD4Q9NZQ9 345 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 SERTAD3Q9UJW9 196 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 GTF2A1LQ9UNN4 478 aa6.32□□□□□ -1.4
PRKDC-208ENST00000536710 GRXCR1A8MXD5 290 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 FCHO1O14526 889 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 CCNT2O60583 730 aaKnown RBP6.31□□□□□ -1.4
PRKDC-208ENST00000536710 NDUFA10O95299 355 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 DHRS4L1P0CG22 281 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 SRGAP2BP0DMP2 458 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 HGFP14210 728 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 PPIFP30405 207 aaKnown RBP6.31□□□□□ -1.4
PRKDC-208ENST00000536710 MAPK9P45984 424 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 FAM189BP81408 668 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 GPS1Q13098 491 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 RESTQ13127 1097 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 PPFIA1Q13136 1202 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 HLXQ14774 488 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-208ENST00000536710 PRKD1Q15139 912 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-208ENST00000536710 TAF5Q15542 800 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 CYP2A13Q16696 494 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 SLC5A9Q2M3M2 681 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 DEPDC1Q5TB30 811 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 VPS53Q5VIR6 699 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 MANEALQ5VSG8 457 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 SULT6B1Q6IMI4 303 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 MZT2AQ6P582 158 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 LRRC55Q6ZSA7 311 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 KRT73Q86Y46 540 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 COLGALT2Q8IYK4 626 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 GRAMD1AQ96CP6 724 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 FAM167BQ9BTA0 163 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 TPSD1Q9BZJ3 242 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 EPS8L2Q9H6S3 715 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 GALNT9Q9HCQ5 603 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 SCAF8Q9UPN6 1271 aaKnown RBP6.31□□□□□ -1.4
PRKDC-208ENST00000536710 JAG2Q9Y219 1238 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms