RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ARID3AQ99856 593 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 SLC46A2Q9BY10 475 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 NIF3L1Q9GZT8 377 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 MFSD1Q9H3U5 465 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 ARHGEF3Q9NR81 526 aa14.02□□□□□ -0.17
PRKDC-206ENST00000536429 ARMCX3Q9UH62 379 aaPredicted RBP14.02□□□□□ -0.17
PRKDC-206ENST00000536429 FGF19O95750 216 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 CCDC130P13994 396 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 CD58P19256 250 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 PAK1Q13153 545 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 TXNDC8Q6A555 127 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 FAM35AQ86V20 835 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 C12orf29Q8N999 325 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 FBXL13Q8NEE6 735 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 RIN3Q8TB24 985 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 WHAMMQ8TF30 809 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 TATDN2Q93075 761 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 SPATA17Q96L03 361 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 MYRFLQ96LU7 910 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 CEP63Q96MT8 703 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 GCNAQ96QF7 691 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 ELOVL4Q9GZR5 314 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 TASP1Q9H6P5 420 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 FAM49BQ9NUQ9 324 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 RAB20Q9NX57 234 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 HCN4Q9Y3Q4 1203 aa14.01□□□□□ -0.17
PRKDC-206ENST00000536429 SHISA7A6NL88 538 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 PPP1R2P41236 205 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 INCA1Q0VD86 236 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 CCDC40Q4G0X9 1142 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 ARHGAP15Q53QZ3 475 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 ASTLQ6HA08 431 aaPredicted RBP14□□□□□ -0.17
PRKDC-206ENST00000536429 FRMD5Q7Z6J6 570 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 FUKQ8N0W3 1084 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 CRYBG2Q8N1P7 616 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 MAB21L3Q8N8X9 362 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 TRIML1Q8N9V2 468 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 PRSS33Q8NF86 280 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 GPT2Q8TD30 523 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 TRMT2BQ96GJ1 504 aaKnown RBP14□□□□□ -0.17
PRKDC-206ENST00000536429 C8orf48Q96LL4 319 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 SLC22A12Q96S37 553 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 KCNK16Q96T55 309 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 MED10Q9BTT4 135 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 IMPG2Q9BZV3 1241 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 FOXQ1Q9C009 403 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 GPR88Q9GZN0 384 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 TBC1D17Q9HA65 648 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 CCL26Q9Y258 94 aa14□□□□□ -0.17
PRKDC-206ENST00000536429 MYO15AQ9UKN7 3530 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 BICDL2A1A5D9 508 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 TRIM66O15016 1216 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 STX10O60499 249 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 CILPO75339 1184 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 BEST1O76090 585 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 PSMC3P17980 439 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 CD72P21854 359 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 GDI1P31150 447 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 SLC44A4Q53GD3 710 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 ZNF394Q53GI3 561 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 FOXR2Q6PJQ5 311 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 DENND5BQ6ZUT9 1274 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 UNC93AQ86WB7 457 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 MFSD6LQ8IWD5 586 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 CMTM8Q8IZV2 173 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 ZMIZ2Q8NF64 920 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 SLC2A14Q8TDB8 520 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 USP13Q92995 863 aaPredicted RBP13.99□□□□□ -0.17
PRKDC-206ENST00000536429 ZFYVE19Q96K21 471 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 TNIP3Q96KP6 325 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 CYP2S1Q96SQ9 504 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 SMOQ99835 787 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 TRMT61BQ9BVS5 477 aaKnown RBP13.99□□□□□ -0.17
PRKDC-206ENST00000536429 SRRTQ9BXP5 876 aaKnown RBP13.99□□□□□ -0.17
PRKDC-206ENST00000536429 BRD9Q9H8M2 597 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 CYP3A43Q9HB55 503 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 HEBP1Q9NRV9 189 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 KRT82Q9NSB4 513 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 COQ4Q9Y3A0 265 aa13.99□□□□□ -0.17
PRKDC-206ENST00000536429 C2orf78A6NCI8 922 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 ARNTLO00327 626 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 STK25O00506 426 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 AP1G2O75843 785 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 AOC1P19801 751 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 ANXA13P27216 316 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 ADORA2BP29275 332 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 FMO5P49326 533 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 IFRD2Q12894 506 aaPredicted RBP13.98□□□□□ -0.17
PRKDC-206ENST00000536429 LRMPQ12912 555 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 MLF2Q15773 248 aaPredicted RBP13.98□□□□□ -0.17
PRKDC-206ENST00000536429 MON1AQ86VX9 555 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 TRIM59Q8IWR1 403 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 CCDC150Q8NCX0 1101 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 SCAMP5Q8TAC9 235 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 DEPDC1BQ8WUY9 529 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 MRPS31Q92665 395 aaKnown RBP13.98□□□□□ -0.17
PRKDC-206ENST00000536429 TTLL2Q9BWV7 592 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 NUP62CLQ9H1M0 184 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 METTL14Q9HCE5 456 aaKnown RBP13.98□□□□□ -0.17
PRKDC-206ENST00000536429 TRPC7Q9HCX4 862 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms