RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 A0A1W2PQ27 194 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 A0A1W2PQ64 194 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 A0A1W2PQD8 194 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 CLIC2O15247 247 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 LRRN2O75325 713 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 NOL4O94818 638 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 PFKFB1P16118 471 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 CASP1P29466 404 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 ATICP31939 592 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 GCGRP47871 477 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 AP3M2P53677 418 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 EMP3P54852 163 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 NLRP12P59046 1061 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 USP46P62068 366 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 ZNF268Q14587 947 aaPredicted RBP11.56□□□□□ -0.56
CCDC60-202ENST00000535685 MAPRE1Q15691 268 aaKnown RBP11.56□□□□□ -0.56
CCDC60-202ENST00000535685 QPCTQ16769 361 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 STXBP5Q5T5C0 1151 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 LMBRD2Q68DH5 695 aaPredicted RBP11.56□□□□□ -0.56
CCDC60-202ENST00000535685 ZC3H14Q6PJT7 736 aaKnown RBP11.56□□□□□ -0.56
CCDC60-202ENST00000535685 VSTM1Q6UX27 236 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 KIAA0895Q8NCT3 520 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 FAM200AQ8TCP9 573 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 POM121Q96HA1 1249 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 FAM84AQ96KN4 292 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 SPATA32Q96LK8 384 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 LRRC3BQ96PB8 259 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 GCNAQ96QF7 691 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 FNBP1Q96RU3 617 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 ARID3AQ99856 593 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 SLC46A2Q9BY10 475 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 SCAND2PQ9GZW5 306 aaPredicted RBP11.56□□□□□ -0.56
CCDC60-202ENST00000535685 CHRDQ9H2X0 955 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 PRMT8Q9NR22 394 aaPredicted RBP11.56□□□□□ -0.56
CCDC60-202ENST00000535685 UXTQ9UBK9 157 aaPredicted RBP11.56□□□□□ -0.56
CCDC60-202ENST00000535685 GTF3C4Q9UKN8 822 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 DMDP11532 3685 aa11.56□□□□□ -0.56
CCDC60-202ENST00000535685 MYBPHLA2RUH7 354 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 PDXKO00764 312 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 CST3P01034 146 aaPredicted RBP11.55□□□□□ -0.56
CCDC60-202ENST00000535685 TNNI1P19237 187 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 CD72P21854 359 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 CYP2F1P24903 491 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 STK4Q13043 487 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 TAF12Q16514 161 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 C4orf50Q6ZRC1 276 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 MON1AQ86VX9 555 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 NELFCDQ8IXH7 590 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 YAF2Q8IY57 180 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 CMTM8Q8IZV2 173 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 CELF5Q8N6W0 485 aaKnown RBP11.55□□□□□ -0.56
CCDC60-202ENST00000535685 BPIFB1Q8TDL5 484 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 GIPC2Q8TF65 315 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 NOC3LQ8WTT2 800 aaKnown RBP11.55□□□□□ -0.56
CCDC60-202ENST00000535685 FAM3CQ92520 227 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 ZNF516Q92618 1163 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 SPATA17Q96L03 361 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 SYT15Q9BQS2 421 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 PI4K2AQ9BTU6 479 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 FAM126AQ9BYI3 521 aaPredicted RBP11.55□□□□□ -0.56
CCDC60-202ENST00000535685 KCTD10Q9H3F6 313 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 KIF9Q9HAQ2 790 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 EXOC1Q9NV70 894 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 PIAS3Q9Y6X2 628 aa11.55□□□□□ -0.56
CCDC60-202ENST00000535685 MYO18AQ92614 2054 aaKnown RBP11.55□□□□□ -0.56
CCDC60-202ENST00000535685 A0A1B0GVL5 298 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 MAPK13O15264 365 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 LAMTOR5O43504 91 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 EXOC3O60645 756 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 RHOBTB3O94955 611 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 PRAMEF12O95522 483 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 DLATP10515 647 aaKnown RBP11.54□□□□□ -0.56
CCDC60-202ENST00000535685 CHRNB1P11230 501 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 TCF3P15923 654 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 PFKLP17858 780 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 ACAT1P24752 427 aaKnown RBP11.54□□□□□ -0.56
CCDC60-202ENST00000535685 LMO2P25791 158 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 SYKP43405 635 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 CYP2J2P51589 502 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 MCCD1P59942 119 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-202ENST00000535685 CYP4F8P98187 520 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 ENPEPQ07075 957 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 NFIL3Q16649 462 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 KMT5BQ4FZB7 885 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 RALGPS2Q86X27 583 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-202ENST00000535685 SPATA2LQ8IUW3 424 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-202ENST00000535685 GRAMD1CQ8IYS0 662 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 KIAA1958Q8N8K9 716 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 ZBTB44Q8NCP5 570 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 MYCBPAPQ8TBZ2 947 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 CSGALNACT1Q8TDX6 532 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 PARD3BQ8TEW8 1205 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 MRPS31Q92665 395 aaKnown RBP11.54□□□□□ -0.56
CCDC60-202ENST00000535685 SYAP1Q96A49 352 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-202ENST00000535685 FAM83CQ9BQN1 747 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 XYLT2Q9H1B5 865 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 CRTAC1Q9NQ79 661 aa11.54□□□□□ -0.56
CCDC60-202ENST00000535685 SPATA6Q9NWH7 488 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-202ENST00000535685 MAGEC2Q9UBF1 373 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-202ENST00000535685 TRAF3IP3Q9Y228 551 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms