RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 SUMO3P55854 103 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 SOX10P56693 466 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 KRT17Q04695 432 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 GALEQ14376 348 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 KIAA0753Q2KHM9 967 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 MGAT5BQ3V5L5 792 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 SLC44A4Q53GD3 710 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 PLA1AQ53H76 456 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 RNF220Q5VTB9 566 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 CYB5RLQ6IPT4 315 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 DPY19L2P1Q6NXN4 242 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 DARS2Q6PI48 645 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 ZNF551Q7Z340 670 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 NTN5Q8WTR8 489 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 NELL1Q92832 810 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 ZNF764Q96H86 408 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 BHMT2Q9H2M3 363 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 ARHGEF3Q9NR81 526 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 PTGFRNQ9P2B2 879 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 ARPP21Q9UBL0 812 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 PAXBP1Q9Y5B6 917 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 TRIM43BA6NCK2 446 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 GOLIM4O00461 696 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 PROP1O75360 226 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 ERBB2P04626 1255 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 IL6RP08887 468 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 EBLN1P0CF75 366 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 JUPP14923 745 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 BRAFP15056 766 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 GPD1P21695 349 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 KCNA3P22001 575 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 FBLP22087 321 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 LIPAP38571 399 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 ALDH9A1P49189 494 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 CCT8P50990 548 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 CLCN2P51788 898 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 DGKEP52429 567 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 ATXN1P54253 815 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 FAM193AP78312 1265 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 POLD3Q15054 466 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 CNGA2Q16280 664 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 TREML2Q5T2D2 321 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 DCAF12L1Q5VU92 463 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 MICU3Q86XE3 530 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 RASAL3Q86YV0 1011 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 OR56A3Q8NH54 315 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 RAPGEF4Q8WZA2 1011 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 TRIM43Q96BQ3 446 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 SARAFQ96BY9 339 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 NMD3Q96D46 503 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 APIPQ96GX9 242 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 A1CFQ9NQ94 594 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 SACM1LQ9NTJ5 587 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 AFF4Q9UHB7 1163 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 ADAM21Q9UKJ8 722 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 SH2B3Q9UQQ2 575 aa4.89□□□□□ -1.63
ATPAF1-211ENST00000534216 PARNO95453 639 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 ONECUT2O95948 504 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 MYF5P13349 255 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 NDUFB7P17568 137 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 RHCEP18577 417 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 DRD4P21917 467 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 PEX2P28328 305 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 PDE6CP51160 858 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 FMO1Q01740 532 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 RHDQ02161 417 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 NHLH1Q02575 133 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 FAM153CQ494X1 144 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 PPP4R4Q6NUP7 873 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 SLC15A3Q8IY34 581 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 ZNF384Q8TF68 577 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 GLG1Q92896 1179 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 LRRC27Q9C0I9 530 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 GLOD4Q9HC38 313 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 XPNPEP3Q9NQH7 507 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 ZSCAN32Q9NX65 697 aa4.88□□□□□ -1.63
ATPAF1-211ENST00000534216 A1L4Q6 167 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 MBD3L4A6NDZ8 208 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 MBD3L3A6NE82 208 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 MGEA5O60502 916 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 C1RP00736 705 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 FESP07332 822 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 SEMA5AQ13591 1074 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 C3orf38Q5JPI3 329 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 DEPDC1Q5TB30 811 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 ANKRD16Q6P6B7 361 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 ZDHHC24Q6UX98 284 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 AMIGO2Q86SJ2 522 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 DGKHQ86XP1 1220 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 BPIFB1Q8TDL5 484 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 SPSB4Q96A44 273 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 TIFAQ96CG3 184 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 WDR26Q9H7D7 661 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 COL20A1Q9P218 1284 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 OGDHLQ9ULD0 1010 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 TBC1D30Q9Y2I9 924 aa4.87□□□□□ -1.63
ATPAF1-211ENST00000534216 PYCARD-AS1I3L0S3 204 aa4.86□□□□□ -1.63
ATPAF1-211ENST00000534216 MAP4K4O95819 1239 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-211ENST00000534216 FAM163BP0C2L3 166 aa4.86□□□□□ -1.63
ATPAF1-211ENST00000534216 ZKSCAN1P17029 563 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms