RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 SYCE1LA8MT33 242 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 HACD1B0YJ81 288 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ZNF487B1APH4 448 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 SNAPC5O75971 98 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 F9P00740 461 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ASNSP08243 561 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 SNHG28P0DPA3 235 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 RALBP11234 206 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ITGA4P13612 1032 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 MAP4P27816 1152 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 SCNN1AP37088 669 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ACADSBP45954 432 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 RPL21P46778 160 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 ARHGDIAP52565 204 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PTK2BQ14289 1009 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 KCTD21Q4G0X4 260 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 TRAPPC3LQ5T215 181 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 C16orf87Q6PH81 154 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 SPOCD1Q6ZMY3 1216 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 NOP9Q86U38 636 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 ERO1BQ86YB8 467 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PSTKQ8IV42 348 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 KIF2BQ8N4N8 673 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.22□□□□□ -1.73
SOX6-217ENST00000533870 ZNF420Q8TAQ5 688 aaPredicted RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 GDAP1Q8TB36 358 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 EPS8L3Q8TE67 593 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 PDCD6IPQ8WUM4 868 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 TMEM174Q8WUU8 243 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 RASSF5Q8WWW0 418 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 POMGNT1Q8WZA1 660 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 MKL1Q969V6 931 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 C9orf16Q9BUW7 83 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 SPATA16Q9BXB7 569 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 MRPS26Q9BYN8 205 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 INO80BQ9C086 356 aaPredicted RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 EHD1Q9H4M9 534 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 USE1Q9NZ43 259 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 STK39Q9UEW8 545 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ANKRD6Q9Y2G4 727 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 MEGF6O75095 1541 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 FLT1P17948 1338 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 A0A087X0B3 334 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 BBIP1A8MTZ0 92 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 H3BRJ5 948 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 TNPO2O14787 897 aaKnown RBP4.21□□□□□ -1.73
SOX6-217ENST00000533870 CHADO15335 359 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 MAP3K13O43283 966 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 ARHGEF9O43307 516 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 PEX11AO75192 247 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 DDX5P17844 614 aaKnown RBP4.21□□□□□ -1.73
SOX6-217ENST00000533870 GCLMP48507 274 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 HARS2P49590 506 aaKnown RBP4.21□□□□□ -1.73
SOX6-217ENST00000533870 ZNF211Q13398 564 aaPredicted RBP4.21□□□□□ -1.73
SOX6-217ENST00000533870 CLEC16AQ2KHT3 1053 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 ECHDC2Q86YB7 292 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 MCOLN2Q8IZK6 566 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 TSPEARQ8WU66 669 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 HAPLN3Q96S86 360 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 SRPK1Q96SB4 655 aaKnown RBP4.21□□□□□ -1.73
SOX6-217ENST00000533870 C1orf50Q9BV19 199 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 MYLK2Q9H1R3 596 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 DNAJC18Q9H819 358 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 EML4Q9HC35 981 aaKnown RBP4.21□□□□□ -1.73
SOX6-217ENST00000533870 RIC8BQ9NVN3 520 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 UBAP1Q9NZ09 502 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 NCKIPSDQ9NZQ3 722 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 FAM8A1Q9UBU6 413 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 TRPC5Q9UL62 973 aaPredicted RBP4.21□□□□□ -1.73
SOX6-217ENST00000533870 FADS3Q9Y5Q0 445 aa4.21□□□□□ -1.73
SOX6-217ENST00000533870 RCCD1A6NED2 376 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PP2D1A8MPX8 630 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 DNAJA2O60884 412 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PSMA2P25787 234 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PPP2R5DQ14738 602 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 ARL13BQ3SXY8 428 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 HP1BP3Q5SSJ5 553 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 HEATR6Q6AI08 1181 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 CNTD1Q8N815 330 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 RNF169Q8NCN4 708 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 GMCL1P1Q8NEA9 526 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PRPF31Q8WWY3 499 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 ABTB1Q969K4 478 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 ANKRD36BP1Q96IX9 119 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 NACA2Q9H009 215 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 THAP2Q9H0W7 228 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 GRHL1Q9NZI5 618 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 HDAC3O15379 428 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 TRMUO75648 421 aaKnown RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 TOM1L1O75674 476 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 RARBP10826 455 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 CYP11B1P15538 503 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 TGM2P21980 687 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 IL12AP29459 219 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 CYP2C18P33260 490 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 CEBPAP49715 358 aaPredicted RBP4.21□□□□□ -1.74
SOX6-217ENST00000533870 RAB27AP51159 221 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 CYP4A11Q02928 519 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 SULT2A1Q06520 285 aa4.21□□□□□ -1.74
SOX6-217ENST00000533870 PDAP1Q13442 181 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms