RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	SCN4B	Q8IWT1	228 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	YAF2	Q8IY57	180 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	MRPS31	Q92665	395 aa	Known RBP	18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	TAF4B	Q92750	862 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	CLDN23	Q96B33	292 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	GSDMA	Q96QA5	445 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	MRPS17	Q9Y2R5	130 aa	Known RBP	18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	PIAS3	Q9Y6X2	628 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644		A8MXQ7	604 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	MAN2B1	O00754	1011 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	DPYSL4	O14531	572 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	ASS1	P00966	412 aa	Known RBP	18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	MAGEA9	P43362	315 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	FZD5	Q13467	585 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	SGSM1	Q2NKQ1	1148 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	ARHGAP29	Q52LW3	1261 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	TXNDC8	Q6A555	127 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	FAM186B	Q8IYM0	893 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	CELF5	Q8N6W0	485 aa	Known RBP	18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	MAB21L3	Q8N8X9	362 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	B3GALNT2	Q8NCR0	500 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	BPIFB1	Q8TDL5	484 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	MSANTD3	Q96H12	275 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	BCO2	Q9BYV7	579 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	SMG9	Q9H0W8	520 aa	Known RBP	18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	SDCBP2	Q9H190	292 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	GREB1	Q4ZG55	1949 aa		18.86	■□□□□ 0.61
BBS1-223	ENST00000533644	TRIM66	O15016	1216 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	TRIM49	P0CI25	452 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	TRIM49C	P0CI26	452 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	PSMC2	P35998	433 aa	Known RBP	18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	AVPR1A	P37288	418 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	RPS9	P46781	194 aa	Known RBP	18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	RAP1GAP	P47736	663 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	CDH8	P55286	799 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	ADAM9	Q13443	819 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	ZNF268	Q14587	947 aa	Predicted RBP	18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	ZNF658	Q5TYW1	1059 aa	Predicted RBP	18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	C1orf210	Q8IVY1	113 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	USP13	Q92995	863 aa	Predicted RBP	18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	ELMO3	Q96BJ8	720 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	C8orf48	Q96LL4	319 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	ELOVL4	Q9GZR5	314 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	KIF9	Q9HAQ2	790 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	TMEM30A	Q9NV96	361 aa		18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	CIZ1	Q9ULV3	898 aa	Predicted RBP	18.85	■□□□□ 0.61
BBS1-223	ENST00000533644	PATJ	Q8NI35	1801 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	GFRA3	O60609	400 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	SMC2	O95347	1197 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	HLA-DRA	P01903	254 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	P4HA1	P13674	534 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	ANXA13	P27216	316 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	GRIK1	P39086	918 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	PIK3CA	P42336	1068 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	PRCP	P42785	496 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	ASPA	P45381	313 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	CACNA2D1	P54289	1103 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	NOP14	P78316	857 aa	Known RBP	18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	PLCB2	Q00722	1185 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	PPP3CA	Q08209	521 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	SCARA5	Q6ZMJ2	495 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	DENND5B	Q6ZUT9	1274 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	ELOA2	Q8IYF1	753 aa	Predicted RBP	18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	CSGALNACT1	Q8TDX6	532 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	ZFYVE19	Q96K21	471 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	TTLL2	Q9BWV7	592 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	B3GNT5	Q9BYG0	378 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	ZNF518B	Q9C0D4	1074 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	TDP1	Q9NUW8	608 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	CCL26	Q9Y258	94 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644	PCDHA5	Q9Y5H7	936 aa		18.84	■□□□□ 0.61
BBS1-223	ENST00000533644		F8VP50	259 aa		18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	NCAM2	O15394	837 aa		18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	KRT13	P13646	458 aa		18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	GCLM	P48507	274 aa		18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	USP46	P62068	366 aa		18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	C1orf228	Q6PIY5	440 aa		18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	ZC3H3	Q8IXZ2	948 aa	Known RBP	18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	MAML2	Q8IZL2	1156 aa	Predicted RBP	18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	FAM3C	Q92520	227 aa		18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	SMARCE1	Q969G3	411 aa		18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	TNIP3	Q96KP6	325 aa		18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	GTPBP4	Q9BZE4	634 aa	Known RBP	18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	C8orf33	Q9H7E9	229 aa	Predicted RBP	18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	EHD2	Q9NZN4	543 aa		18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	HOOK1	Q9UJC3	728 aa	Known RBP	18.83	■□□□□ 0.6
BBS1-223	ENST00000533644	CLSTN1	O94985	981 aa		18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	GTF2H1	P32780	548 aa		18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	SPOPL	Q6IQ16	392 aa		18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	FRMD5	Q7Z6J6	570 aa		18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	RIN3	Q8TB24	985 aa		18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	TAS1R2	Q8TE23	839 aa		18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	ERCC4	Q92889	916 aa	Predicted RBP	18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	SLC22A12	Q96S37	553 aa		18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	FAM83C	Q9BQN1	747 aa		18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	TMEM8A	Q9HCN3	771 aa		18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	SPATA6	Q9NWH7	488 aa	Predicted RBP	18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	THG1L	Q9NWX6	298 aa	Known RBP	18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	GTSE1	Q9NYZ3	720 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms