RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 VCPP55072 806 aaKnown RBP13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 STARD6P59095 220 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 PRKCQQ04759 706 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 TEAD2Q15562 447 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 MAN2A1Q16706 1144 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 SGSM1Q2NKQ1 1148 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 ZNF667Q5HYK9 610 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 IER5LQ5T953 404 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 CWF19L1Q69YN2 538 aaKnown RBP13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 TANGO2Q6ICL3 276 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 SCARA5Q6ZMJ2 495 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 C4orf50Q6ZRC1 276 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 LUZP1Q86V48 1076 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 FAM200AQ8TCP9 573 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 TAS1R2Q8TE23 839 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 DEPDC1BQ8WUY9 529 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 TAF4BQ92750 862 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 ELMO3Q96BJ8 720 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 SHDQ96IW2 340 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 MYRFLQ96LU7 910 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 ZSWIM3Q96MP5 696 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 KXD1Q9BQD3 176 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 PI4K2AQ9BTU6 479 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 IRF2BPLQ9H1B7 796 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 IL21Q9HBE4 155 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 ZNF334Q9HCZ1 680 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 TRPV5Q9NQA5 729 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 ARHGEF3Q9NR81 526 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 RAB20Q9NX57 234 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 OBP2AQ9NY56 170 aa13.8□□□□□ -0.2
TRAPPC4-212ENST00000533058 A0A1W2PRU2 124 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 MYBPHLA2RUH7 354 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 HMGA1P17096 107 aaKnown RBP13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 ACAT1P24752 427 aaKnown RBP13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 GABRR2P28476 465 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 LRMPQ12912 555 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 NCAPHQ15003 741 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 ARHGAP15Q53QZ3 475 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 CDKAL1Q5VV42 579 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 VSTM1Q6UX27 236 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 SPATA2LQ8IUW3 424 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 TMEM105Q8N8V8 129 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 ZSCAN18Q8TBC5 510 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 DNASE1L2Q92874 299 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 FAM122AQ96E09 287 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 TRMT2BQ96GJ1 504 aaKnown RBP13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 LPIN3Q9BQK8 851 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 SYT15Q9BQS2 421 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 ANP32EQ9BTT0 268 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 DDX23Q9BUQ8 820 aaKnown RBP13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 PLA2G2FQ9BZM2 168 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 VPS16Q9H269 839 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 CRTAC1Q9NQ79 661 aa13.79□□□□□ -0.2
TRAPPC4-212ENST00000533058 P4HA2O15460 535 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 NOL4O94818 638 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 GJA1P17302 382 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 PSMC3P17980 439 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 CYP2F1P24903 491 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 DDX6P26196 483 aaKnown RBP eCLIP13.78□□□□□ -0.23e-7■□□□□ 9.5
TRAPPC4-212ENST00000533058 PTPN5P54829 565 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 ZNF445P59923 1031 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 NOP14P78316 857 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 IQCB1Q15051 598 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 KRT31Q15323 416 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 TAF12Q16514 161 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 VWA3BQ502W6 1294 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 SLC44A4Q53GD3 710 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 FKBP15Q5T1M5 1219 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 SPOPLQ6IQ16 392 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 MFSD6LQ8IWD5 586 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 RNF214Q8ND24 703 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 PRSS33Q8NF86 280 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 ST13P5Q8NFI4 369 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 MYCBPAPQ8TBZ2 947 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 SEMA4DQ92854 862 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 SPATA17Q96L03 361 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 MRPL45Q9BRJ2 306 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 CRACR2AQ9BSW2 395 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 TRMT61BQ9BVS5 477 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 SNX25Q9H3E2 840 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 ATXN3LQ9H3M9 355 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 NDST4Q9H3R1 872 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 TASP1Q9H6P5 420 aa13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 UXTQ9UBK9 157 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-212ENST00000533058 GALR2O43603 387 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 HCRTO43612 131 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 ATP2C2O75185 946 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 ASS1P00966 412 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 F11P03951 625 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 MLLT6P55198 1093 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 FCHO2Q0JRZ9 810 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 GBP6Q6ZN66 633 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 TMEM150AQ86TG1 271 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 ARID3BQ8IVW6 561 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 FLCNQ8NFG4 579 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 OR6B3Q8NGW1 331 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 GIPC2Q8TF65 315 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 IRF7Q92985 503 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 PCED1BQ96HM7 432 aa13.77□□□□□ -0.21
TRAPPC4-212ENST00000533058 FAXDC2Q96IV6 333 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms