RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 UXTQ9UBK9 157 aaPredicted RBP16.37■□□□□ 0.21
CPSF1-210ENST00000532935 PATJQ8NI35 1801 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 KIF26AQ9ULI4 1882 aaPredicted RBP16.37■□□□□ 0.21
CPSF1-210ENST00000532935 HEPACAM2A8MVW5 462 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 CLDN5O00501 218 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 LRRN2O75325 713 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 ANXA13P27216 316 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 AVPR2P30518 371 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 CLCN5P51795 746 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 NDST1P52848 882 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 PAK1Q13153 545 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 GRM2Q14416 872 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 ASTLQ6HA08 431 aaPredicted RBP16.36■□□□□ 0.21
CPSF1-210ENST00000532935 FRMD5Q7Z6J6 570 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 FILIP1Q7Z7B0 1213 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 ACOT1Q86TX2 421 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 UNC93AQ86WB7 457 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 ARID3BQ8IVW6 561 aaPredicted RBP16.36■□□□□ 0.21
CPSF1-210ENST00000532935 FBXL13Q8NEE6 735 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 E2F7Q96AV8 911 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 CEP295NLQ96MC4 621 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 TRMT61BQ9BVS5 477 aaKnown RBP16.36■□□□□ 0.21
CPSF1-210ENST00000532935 ZNF518BQ9C0D4 1074 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 CLSTN2Q9H4D0 955 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 CYP3A43Q9HB55 503 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 METTL14Q9HCE5 456 aaKnown RBP16.36■□□□□ 0.21
CPSF1-210ENST00000532935 RAB20Q9NX57 234 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 HMGXB4Q9UGU5 601 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 ARIH1Q9Y4X5 557 aaPredicted RBP16.36■□□□□ 0.21
CPSF1-210ENST00000532935 NCANO14594 1321 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 COL4A3Q01955 1670 aa16.36■□□□□ 0.21
CPSF1-210ENST00000532935 F8VP50 259 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 TADA3O75528 432 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 PSMC3P17980 439 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 DDX6P26196 483 aaKnown RBP eCLIP16.35■□□□□ 0.21
CPSF1-210ENST00000532935 WEE1P30291 646 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 CACNA2D1P54289 1103 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 STX17P56962 302 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 INCA1Q0VD86 236 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 ORC1Q13415 861 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 CCDC40Q4G0X9 1142 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 CBWD6Q4V339 395 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 CBWD3Q5JTY5 395 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 CBWD5Q5RIA9 395 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 IER5LQ5T953 404 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 GPIHBP1Q8IV16 184 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 MFSD6LQ8IWD5 586 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 TMEM105Q8N8V8 129 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 DEPDC1BQ8WUY9 529 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 SLC35C1Q96A29 364 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 RSPRY1Q96DX4 576 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 C8orf48Q96LL4 319 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 SLC46A2Q9BY10 475 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 KCNH6Q9H252 994 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 TMEM30AQ9NV96 361 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 ZMYM5Q9UJ78 669 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 ATP8B3O60423 1300 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 MYO16Q9Y6X6 1858 aa16.35■□□□□ 0.21
CPSF1-210ENST00000532935 STK25O00506 426 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 AOC1P19801 751 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 RFX1P22670 979 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 GDI1P31150 447 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 MLF2Q15773 248 aaPredicted RBP16.34■□□□□ 0.21
CPSF1-210ENST00000532935 SLC44A4Q53GD3 710 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 DENND5BQ6ZUT9 1274 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 PAQR9Q6ZVX9 377 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 FAM35AQ86V20 835 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 CRYBG2Q8N1P7 616 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 MAB21L3Q8N8X9 362 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 MRPS31Q92665 395 aaKnown RBP16.34■□□□□ 0.21
CPSF1-210ENST00000532935 FAXDC2Q96IV6 333 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 MED10Q9BTT4 135 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 TBC1D17Q9HA65 648 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 LMBRD1Q9NUN5 540 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 COQ4Q9Y3A0 265 aa16.34■□□□□ 0.21
CPSF1-210ENST00000532935 SOBPA7XYQ1 873 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 DPYSL4O14531 572 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 PRAMEF12O95522 483 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 CD58P19256 250 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 STARD6P59095 220 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 USP46P62068 366 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 PRKCQQ04759 706 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 WDR44Q5JSH3 913 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 TXNDC8Q6A555 127 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 PHLDB3Q6NSJ2 640 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 MON1AQ86VX9 555 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 CMTM8Q8IZV2 173 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 FUKQ8N0W3 1084 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 DNASE1L2Q92874 299 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 IRF7Q92985 503 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 SMARCD1Q96GM5 515 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 SHDQ96IW2 340 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 GBP4Q96PP9 640 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 TWNKQ96RR1 684 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 OBP2AQ9NY56 170 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 EHD2Q9NZN4 543 aa16.33■□□□□ 0.2
CPSF1-210ENST00000532935 ZNF263O14978 683 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 PI15O43692 258 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 CILPO75339 1184 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms