RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 TMLHEQ9NVH6 421 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 CDH9Q9ULB4 789 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 RWDD3Q9Y3V2 267 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 HYOU1Q9Y4L1 999 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 PIK3R2O00459 728 aa23.2■■□□□ 1.3
PACSIN3-209ENST00000532457 URI1O94763 535 aaPredicted RBP23.2■■□□□ 1.3
PACSIN3-209ENST00000532457 PDCLQ13371 301 aa23.2■■□□□ 1.3
PACSIN3-209ENST00000532457 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.2■■□□□ 1.3
PACSIN3-209ENST00000532457 METTL23Q86XA0 190 aa23.2■■□□□ 1.3
PACSIN3-209ENST00000532457 ZNF564Q8TBZ8 553 aaPredicted RBP23.2■■□□□ 1.3
PACSIN3-209ENST00000532457 B3GALT6Q96L58 329 aa23.2■■□□□ 1.3
PACSIN3-209ENST00000532457 ACBD6Q9BR61 282 aa23.2■■□□□ 1.3
PACSIN3-209ENST00000532457 DSEQ9UL01 958 aa23.2■■□□□ 1.3
PACSIN3-209ENST00000532457 PACSIN2Q9UNF0 486 aaPredicted RBP23.2■■□□□ 1.3
PACSIN3-209ENST00000532457 JRKLQ9Y4A0 524 aa23.2■■□□□ 1.3
PACSIN3-209ENST00000532457 BEST1O76090 585 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 CA3P07451 260 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 ALDH7A1P49419 539 aaKnown RBP23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 RGS7P49802 495 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 AMPD2Q01433 879 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 FAM171BQ6P995 826 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 TRIM11Q96F44 468 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 ALS2CR12Q96Q35 445 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 SLC28A3Q9HAS3 691 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 UVRAGQ9P2Y5 699 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 LCHNA4D1U4 455 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 MYOGP15173 224 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 LAG3P18627 525 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 DNAJB2P25686 324 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 PBX2P40425 430 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 GABRB2P47870 512 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 MEI1Q5TIA1 1274 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 LIN9Q5TKA1 542 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 PAPD7Q5XG87 772 aaKnown RBP23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 PPP1R2P3Q6NXS1 205 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 SPATA18Q8TC71 538 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 CLP1Q92989 425 aaKnown RBP23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 C18orf8Q96DM3 657 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 PCED1BQ96HM7 432 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 TMEM30AQ9NV96 361 aa23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 MRPL42Q9Y6G3 142 aaKnown RBP23.19■■□□□ 1.3
PACSIN3-209ENST00000532457 VWA8A3KMH1 1905 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 LINC01553A4QN01 128 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 OAZ2O95190 189 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 CALB1P05937 261 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 IFI16Q16666 785 aaKnown RBP23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 FAM171A1Q5VUB5 890 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 DAAM2Q86T65 1068 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 XYLT1Q86Y38 959 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 MYCBPAPQ8TBZ2 947 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 SLC4A5Q9BY07 1137 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 HESX1Q9UBX0 185 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 YBX2Q9Y2T7 364 aaKnown RBP23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 PCDHB12Q9Y5F1 795 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 GBF1Q92538 1859 aa23.18■■□□□ 1.3
PACSIN3-209ENST00000532457 SRGAP2O75044 1071 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 EFEMP2O95967 443 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 PCSK1P29120 753 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 CACNA2D1P54289 1103 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 RPL7AP62424 266 aaKnown RBP23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 YWHAHQ04917 246 aaPredicted RBP23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 MESDQ14696 234 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 INTS6LQ5JSJ4 861 aaKnown RBP23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 PPP1R15BQ5SWA1 713 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 NT5DC3Q86UY8 548 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 SAMD11Q96NU1 681 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 RHOBTB2Q9BYZ6 727 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 ST7Q9NRC1 585 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 ALG6Q9Y672 507 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 TRIOBPQ9H2D6 2365 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 E5RJQ4 531 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 TRAPPC3O43617 180 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 FGFR3P22607 806 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 MRPL58Q14197 206 aaKnown RBP23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 PPP2R2DQ66LE6 453 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 FUT10Q6P4F1 479 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 CEP57Q86XR8 500 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 ZNF558Q96NG5 402 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 VN1R3Q9BXE9 311 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 DUSP16Q9BY84 665 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 PARVAQ9NVD7 372 aa23.17■■□□□ 1.3
PACSIN3-209ENST00000532457 CHD9Q3L8U1 2897 aa23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 TMEM110-MUSTN1A8MSY1 372 aa23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 OR4Q2P0C623 313 aa23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 PLCB3Q01970 1234 aa23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 BST2Q10589 180 aaKnown RBP23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 VARS2Q5ST30 1063 aaKnown RBP23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 TMEM110Q86TL2 294 aa23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 THEM5Q8N1Q8 247 aa23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 TIFAQ96CG3 184 aa23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 TGS1Q96RS0 853 aaKnown RBP23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 MED10Q9BTT4 135 aa23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 NKX2-4Q9H2Z4 354 aa23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 L2HGDHQ9H9P8 463 aa23.16■■□□□ 1.3
PACSIN3-209ENST00000532457 GOLGA8SH3BPF8 625 aa23.15■■□□□ 1.3
PACSIN3-209ENST00000532457 PPM1AP35813 382 aa23.15■■□□□ 1.3
PACSIN3-209ENST00000532457 RPL34P49207 117 aaKnown RBP23.15■■□□□ 1.3
PACSIN3-209ENST00000532457 BCAT1P54687 386 aa23.15■■□□□ 1.3
PACSIN3-209ENST00000532457 ZNF268Q14587 947 aaPredicted RBP23.15■■□□□ 1.3
PACSIN3-209ENST00000532457 KCNT2Q6UVM3 1135 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms