RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 LOXL3P58215 753 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 PLP2Q04941 152 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 IQCB1Q15051 598 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 SLC4A8Q2Y0W8 1093 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.49□□□□□ -1.85
CD44-234ENST00000531873 NT5DC1Q5TFE4 455 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 MANEALQ5VSG8 457 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 SPTY2D1Q68D10 685 aaPredicted RBP3.49□□□□□ -1.85
CD44-234ENST00000531873 MRNIPQ6NTE8 343 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 SLC30A10Q6XR72 485 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 HTR3DQ70Z44 454 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 MOGAT3Q86VF5 341 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 TAX1BP1Q86VP1 789 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 KRT73Q86Y46 540 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 GATAD2AQ86YP4 633 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 TMTC1Q8IUR5 882 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 CPOQ8IVL8 374 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 RHOT2Q8IXI1 618 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 FUKQ8N0W3 1084 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 LGI4Q8N135 537 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 Q8NA96 180 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 SYT8Q8NBV8 401 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 CCDC150Q8NCX0 1101 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 POC1BQ8TC44 478 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 SPPL3Q8TCT6 385 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 USP13Q92995 863 aaPredicted RBP3.49□□□□□ -1.85
CD44-234ENST00000531873 PHACTR3Q96KR7 559 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 PRPF18Q99633 342 aaKnown RBP3.49□□□□□ -1.85
CD44-234ENST00000531873 SMOQ99835 787 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 DDX23Q9BUQ8 820 aaKnown RBP3.49□□□□□ -1.85
CD44-234ENST00000531873 SLC46A2Q9BY10 475 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 PABPC3Q9H361 631 aaKnown RBP3.49□□□□□ -1.85
CD44-234ENST00000531873 CXorf36Q9H7Y0 433 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 PRDM8Q9NQV8 689 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 TERF2IPQ9NYB0 399 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 POGKQ9P215 609 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 VPS51Q9UID3 782 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 FEM1BQ9UK73 627 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 CLCA2Q9UQC9 943 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 MTO1Q9Y2Z2 717 aaKnown RBP3.49□□□□□ -1.85
CD44-234ENST00000531873 DUSP10Q9Y6W6 482 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 AATKQ6ZMQ8 1374 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 CCDC195A0A1B0GUA6 201 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 hCG_1984214I3L0E3 225 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 J3KRW8 73 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 FCHO1O14526 889 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 LAMTOR5O43504 91 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 FOXS1O43638 330 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 PIAS2O75928 621 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 RAD17O75943 681 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 SUN1O94901 812 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 ZFPL1O95159 310 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 GLP2RO95838 553 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 CSF1RP07333 972 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 ITGA2BP08514 1039 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 ATXN1LP0C7T5 689 aaKnown RBP3.48□□□□□ -1.85
CD44-234ENST00000531873 IDEP14735 1019 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 JUPP14923 745 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 TNFRSF1AP19438 455 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 KCNA3P22001 575 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 CST5P28325 142 aaPredicted RBP3.48□□□□□ -1.85
CD44-234ENST00000531873 SLC5A2P31639 672 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 APOBEC3AP31941 199 aaPredicted RBP3.48□□□□□ -1.85
CD44-234ENST00000531873 GCLCP48506 637 aaPredicted RBP3.48□□□□□ -1.85
CD44-234ENST00000531873 SEC24CP53992 1094 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 PRKAA2P54646 552 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 GEMIN4P57678 1058 aaKnown RBP3.48□□□□□ -1.85
CD44-234ENST00000531873 OCA2Q04671 838 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 KRT17Q04695 432 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 PIGFQ07326 219 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 NSUN2Q08J23 767 aaKnown RBP eCLIP3.48□□□□□ -1.85
CD44-234ENST00000531873 MYO1EQ12965 1108 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 FHL3Q13643 280 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 INSCQ1MX18 579 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 MGAT5BQ3V5L5 792 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 FBXO47Q5MNV8 452 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 INTS11Q5TA45 600 aaKnown RBP3.48□□□□□ -1.85
CD44-234ENST00000531873 FAXCQ5TGI0 409 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 CACHD1Q5VU97 1274 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 SLFN13Q68D06 897 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 NAIF1Q69YI7 327 aaPredicted RBP3.48□□□□□ -1.85
CD44-234ENST00000531873 TCTN3Q6NUS6 607 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 MZT2AQ6P582 158 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 LRRC55Q6ZSA7 311 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 PCGF5Q86SE9 256 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 LRRTM4Q86VH4 590 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 HERC6Q8IVU3 1022 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 NAXEQ8NCW5 288 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 SCAMP5Q8TAC9 235 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 BPIFB1Q8TDL5 484 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 ASB12Q8WXK4 309 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 HERVK_113Q902F9 699 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 ZSCAN31Q96LW9 406 aaPredicted RBP3.48□□□□□ -1.85
CD44-234ENST00000531873 PPM1MQ96MI6 270 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 MOGAT1Q96PD6 335 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 MED15Q96RN5 788 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 PNKPQ96T60 521 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 MPHOSPH9Q99550 1183 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 ZSWIM1Q9BR11 485 aa3.48□□□□□ -1.85
CD44-234ENST00000531873 FAM167BQ9BTA0 163 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms