RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 MBTPS2O43462 519 aa22.63■■□□□ 1.21
CAPN1-220ENST00000530567 TRIM21P19474 475 aaKnown RBP22.63■■□□□ 1.21
CAPN1-220ENST00000530567 ADORA2BP29275 332 aa22.63■■□□□ 1.21
CAPN1-220ENST00000530567 ALDH1A3P47895 512 aa22.63■■□□□ 1.21
CAPN1-220ENST00000530567 CYP26C1Q6V0L0 522 aa22.63■■□□□ 1.21
CAPN1-220ENST00000530567 ZMIZ2Q8NF64 920 aa22.63■■□□□ 1.21
CAPN1-220ENST00000530567 SMARCD1Q96GM5 515 aa22.63■■□□□ 1.21
CAPN1-220ENST00000530567 MED10Q9BTT4 135 aa22.63■■□□□ 1.21
CAPN1-220ENST00000530567 DNAI2Q9GZS0 605 aa22.63■■□□□ 1.21
CAPN1-220ENST00000530567 NLRC4Q9NPP4 1024 aa22.63■■□□□ 1.21
CAPN1-220ENST00000530567 DENND4AQ7Z401 1863 aa22.63■■□□□ 1.21
CAPN1-220ENST00000530567 F8VP50 259 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 VDRP11473 427 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 CD19P15391 556 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 BRD2P25440 801 aaKnown RBP22.62■■□□□ 1.21
CAPN1-220ENST00000530567 PLD1Q13393 1074 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 SARM1Q6SZW1 724 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 SCN4BQ8IWT1 228 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 STKLD1Q8NE28 680 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 GPR152Q8TDT2 470 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 SMOQ99835 787 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 TTYH3Q9C0H2 523 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 HCFC1R1Q9NWW0 138 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 KIAA1257Q9ULG3 409 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 ATP8B3O60423 1300 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 PATJQ8NI35 1801 aa22.62■■□□□ 1.21
CAPN1-220ENST00000530567 GREB1Q4ZG55 1949 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 CYP26A1O43174 497 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 XYLBO75191 536 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 AP1G2O75843 785 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 BEST1O76090 585 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 USP8P40818 1118 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 EPHB3P54753 998 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 RPL10AP62906 217 aaKnown RBP22.61■■□□□ 1.21
CAPN1-220ENST00000530567 SGO2Q562F6 1265 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 CES5AQ6NT32 575 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 GIPC2Q8TF65 315 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 PSMG2Q969U7 264 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 C8orf48Q96LL4 319 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 LRRC3Q9BY71 257 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 CSNK1G1Q9HCP0 422 aa22.61■■□□□ 1.21
CAPN1-220ENST00000530567 DNMT3BQ9UBC3 853 aaKnown RBP22.61■■□□□ 1.21
CAPN1-220ENST00000530567 FAM200BP0CF97 657 aa22.6■■□□□ 1.21
CAPN1-220ENST00000530567 CLCN1P35523 988 aa22.6■■□□□ 1.21
CAPN1-220ENST00000530567 GRIK1P39086 918 aa22.6■■□□□ 1.21
CAPN1-220ENST00000530567 NTHL1P78549 312 aa22.6■■□□□ 1.21
CAPN1-220ENST00000530567 GOLGA7BQ2TAP0 167 aa22.6■■□□□ 1.21
CAPN1-220ENST00000530567 CLEC20AQ6ZU45 233 aa22.6■■□□□ 1.21
CAPN1-220ENST00000530567 GRASPQ7Z6J2 395 aaPredicted RBP22.6■■□□□ 1.21
CAPN1-220ENST00000530567 TTC30AQ86WT1 665 aa22.6■■□□□ 1.21
CAPN1-220ENST00000530567 TMC8Q8IU68 726 aa22.6■■□□□ 1.21
CAPN1-220ENST00000530567 BAP1Q92560 729 aa22.6■■□□□ 1.21
CAPN1-220ENST00000530567 KCNK16Q96T55 309 aa22.6■■□□□ 1.21
CAPN1-220ENST00000530567 DMAP1Q9NPF5 467 aaPredicted RBP22.6■■□□□ 1.21
CAPN1-220ENST00000530567 TSPAN16Q9UKR8 245 aa22.6■■□□□ 1.21
CAPN1-220ENST00000530567 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.6■■□□□ 1.21
CAPN1-220ENST00000530567 C5orf42Q9H799 3197 aa22.59■■□□□ 1.21
CAPN1-220ENST00000530567 NRG2O14511 850 aaPredicted RBP22.59■■□□□ 1.21
CAPN1-220ENST00000530567 TRIM66O15016 1216 aa22.59■■□□□ 1.21
CAPN1-220ENST00000530567 HMGA1P17096 107 aaKnown RBP22.59■■□□□ 1.21
CAPN1-220ENST00000530567 MTMR3Q13615 1198 aa22.59■■□□□ 1.21
CAPN1-220ENST00000530567 PKDCCQ504Y2 493 aa22.59■■□□□ 1.21
CAPN1-220ENST00000530567 DNAJB7Q7Z6W7 309 aaPredicted RBP22.59■■□□□ 1.21
CAPN1-220ENST00000530567 SPATA17Q96L03 361 aa22.59■■□□□ 1.21
CAPN1-220ENST00000530567 PIDD1Q9HB75 910 aa22.59■■□□□ 1.21
CAPN1-220ENST00000530567 ASB3Q9Y575 518 aa22.59■■□□□ 1.21
CAPN1-220ENST00000530567 MYH10P35580 1976 aa22.59■■□□□ 1.21
CAPN1-220ENST00000530567 CBFA2T2O43439 604 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 NPR3P17342 541 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 GNA15P30679 374 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 MTHFRP42898 656 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 KCNQ1P51787 676 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 EPHA5P54756 1037 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 CBX2Q14781 532 aaPredicted RBP22.58■■□□□ 1.21
CAPN1-220ENST00000530567 VEPH1Q14D04 833 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 CNGA2Q16280 664 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 ATAT1Q5SQI0 421 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 PTCRAQ6ISU1 281 aaPredicted RBP22.58■■□□□ 1.21
CAPN1-220ENST00000530567 LCLAT1Q6UWP7 414 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 SLC47A2Q86VL8 602 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 HS6ST3Q8IZP7 471 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 ANKRD52Q8NB46 1076 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 CEP295NLQ96MC4 621 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 ZNF512Q96ME7 567 aaPredicted RBP22.58■■□□□ 1.21
CAPN1-220ENST00000530567 RIPOR3Q96MK2 946 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 DUSP16Q9BY84 665 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 POMKQ9H5K3 350 aa22.58■■□□□ 1.21
CAPN1-220ENST00000530567 ZNF334Q9HCZ1 680 aaPredicted RBP22.58■■□□□ 1.21
CAPN1-220ENST00000530567 WDR6Q9NNW5 1121 aaKnown RBP22.58■■□□□ 1.21
CAPN1-220ENST00000530567 CLUHO75153 1309 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 SLC38A8A6NNN8 435 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 HHLA1C9JL84 531 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 RHOP08100 348 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 SOX5P35711 763 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 MAP3K7CLP57077 242 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 SMAD2Q15796 467 aaKnown RBP22.57■■□□□ 1.2
CAPN1-220ENST00000530567 FIGNQ5HY92 759 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 ELMOD1Q8N336 334 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 ZNF606Q8WXB4 792 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 SPAG5Q96R06 1193 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms