RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 FKBP15Q5T1M5 1219 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 JAKMIP3Q5VZ66 844 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 JMJD6Q6NYC1 403 aaPredicted RBP3.81□□□□□ -1.8
BRCA2-203ENST00000528762 ZDHHC24Q6UX98 284 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 USP49Q70CQ1 688 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 MED25Q71SY5 747 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 DOK3Q7L591 496 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 GPRIN1Q7Z2K8 1008 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 TMPRSS6Q8IU80 811 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 GALNT15Q8N3T1 639 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 MB21D1Q8N884 522 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 TMIEQ8NEW7 156 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 SMCR8Q8TEV9 937 aaPredicted RBP3.81□□□□□ -1.8
BRCA2-203ENST00000528762 RAPGEF4Q8WZA2 1011 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 UBXN10Q96LJ8 280 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 ZSCAN31Q96LW9 406 aaPredicted RBP3.81□□□□□ -1.8
BRCA2-203ENST00000528762 PPM1MQ96MI6 270 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 AGAP2Q99490 1192 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 FAM167BQ9BTA0 163 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 TTPALQ9BTX7 342 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 CNPPD1Q9BV87 410 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 SPATA5L1Q9BVQ7 753 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 LSM14BQ9BX40 385 aaKnown RBP3.81□□□□□ -1.8
BRCA2-203ENST00000528762 TINAGL1Q9GZM7 467 aaPredicted RBP3.81□□□□□ -1.8
BRCA2-203ENST00000528762 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.81□□□□□ -1.8
BRCA2-203ENST00000528762 MSL2Q9HCI7 577 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 TMEM8AQ9HCN3 771 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 RRN3Q9NYV6 651 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 IGSF9Q9P2J2 1179 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 SWAP70Q9UH65 585 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 CAPN11Q9UMQ6 739 aa3.81□□□□□ -1.8
BRCA2-203ENST00000528762 LOC102723971A0A1B0GUV8 181 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 CDHR4A6H8M9 788 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 KCNQ3O43525 872 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 COQ9O75208 318 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 VPS4BO75351 444 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 RHOBTB3O94955 611 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 ITGA5P08648 1049 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 TPH1P17752 444 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 KRT4P19013 534 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 GNAT2P19087 354 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 MAKP20794 623 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 SLC6A2P23975 617 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 MGAT1P26572 445 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 VIPR2P41587 438 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 CPT1AP50416 773 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 TCF15Q12870 199 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 CNGB1Q14028 1251 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-203ENST00000528762 IQCB1Q15051 598 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 ELAVL1Q15717 326 aaKnown RBP3.8□□□□□ -1.8
BRCA2-203ENST00000528762 MAPKAPK3Q16644 382 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 INSCQ1MX18 579 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 SLC4A8Q2Y0W8 1093 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 PLA1AQ53H76 456 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 INTS11Q5TA45 600 aaKnown RBP3.8□□□□□ -1.8
BRCA2-203ENST00000528762 ARL6IP4Q66PJ3 421 aaKnown RBP3.8□□□□□ -1.8
BRCA2-203ENST00000528762 PLAG1Q6DJT9 500 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 DRICH1Q6PGQ1 229 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-203ENST00000528762 USP17L6PQ6QN14 398 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 KIAA0408Q6ZU52 694 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 RFX8Q6ZV50 586 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 KRT73Q86Y46 540 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 CCDC117Q8IWD4 279 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-203ENST00000528762 ELOA2Q8IYF1 753 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-203ENST00000528762 PDPRQ8NCN5 879 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 FAM71BQ8TC56 605 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 NUP133Q8WUM0 1156 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 ST8SIA2Q92186 375 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 PHACTR3Q96KR7 559 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 KLHL32Q96NJ5 620 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 PPP1R9BQ96SB3 815 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 MESP1Q9BRJ9 268 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 CPEB1Q9BZB8 566 aaKnown RBP3.8□□□□□ -1.8
BRCA2-203ENST00000528762 DHX36Q9H2U1 1008 aaKnown RBP3.8□□□□□ -1.8
BRCA2-203ENST00000528762 NRDE2Q9H7Z3 1164 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 HEYLQ9NQ87 328 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-203ENST00000528762 PARPBPQ9NWS1 579 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 DKK4Q9UBT3 224 aa3.8□□□□□ -1.8
BRCA2-203ENST00000528762 ZMYND8Q9ULU4 1186 aaPredicted RBP3.8□□□□□ -1.8
BRCA2-203ENST00000528762 KRTAP23-1A1A580 65 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 AQP12BA6NM10 295 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 E9PLN8 166 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 J3KRW8 73 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 IPO5O00410 1097 aaKnown RBP3.79□□□□□ -1.8
BRCA2-203ENST00000528762 POLRMTO00411 1230 aaKnown RBP3.79□□□□□ -1.8
BRCA2-203ENST00000528762 IRAK2O43187 625 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 CCP110O43303 1012 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 PRSS23O95084 383 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 ITGB1P05556 798 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 ACVR2AP27037 513 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 MAN1A1P33908 653 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 DDIT3P35638 169 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 RXRGP48443 463 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 SATB1Q01826 763 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 PIGFQ07326 219 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 TBX2Q13207 712 aaPredicted RBP3.79□□□□□ -1.8
BRCA2-203ENST00000528762 TAF5Q15542 800 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 NPY5RQ15761 445 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 TAF12Q16514 161 aa3.79□□□□□ -1.8
BRCA2-203ENST00000528762 CSRP2Q16527 193 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms