RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	SCARA5	Q6ZMJ2	495 aa		24.53	■■□□□ 1.52
GSDMD-208	ENST00000528475	OTOA	Q7RTW8	1153 aa		24.53	■■□□□ 1.52
GSDMD-208	ENST00000528475	EXOC8	Q8IYI6	725 aa		24.53	■■□□□ 1.52
GSDMD-208	ENST00000528475	ANKRD36BP1	Q96IX9	119 aa		24.53	■■□□□ 1.52
GSDMD-208	ENST00000528475	PAFAH2	Q99487	392 aa		24.53	■■□□□ 1.52
GSDMD-208	ENST00000528475	WDR83	Q9BRX9	315 aa	Known RBP	24.53	■■□□□ 1.52
GSDMD-208	ENST00000528475	PPP1R1B	Q9UD71	204 aa	Predicted RBP	24.53	■■□□□ 1.52
GSDMD-208	ENST00000528475	CYTH4	Q9UIA0	394 aa		24.53	■■□□□ 1.52
GSDMD-208	ENST00000528475	LOC102724159	A0A0B4J2E5	919 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	C2CD2L	O14523	706 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	HGS	O14964	777 aa	Predicted RBP	24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	TGFB3	P10600	412 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	TCF7	P36402	384 aa	Predicted RBP	24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	PSMC1	P62191	440 aa	Known RBP	24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	GAD2	Q05329	585 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	PWP2	Q15269	919 aa	Known RBP	24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	SLC45A4	Q5BKX6	768 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	MPZL3	Q6UWV2	235 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	C3orf62	Q6ZUJ4	267 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	RHPN2	Q8IUC4	686 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	KIAA0319L	Q8IZA0	1049 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	MAB21L3	Q8N8X9	362 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	CMAS	Q8NFW8	434 aa	Predicted RBP	24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	KLRG1	Q96E93	195 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	BCO2	Q9BYV7	579 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	PTPRH	Q9HD43	1115 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	SAE1	Q9UBE0	346 aa	Predicted RBP	24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	AFG3L2	Q9Y4W6	797 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	IGKV6-21	A0A0C4DH24	114 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	APOC4-APOC2	K7ER74	178 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	TRAFD1	O14545	582 aa	Predicted RBP	24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	APOC2	P02655	101 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	SMTNL2	Q2TAL5	461 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	TSHZ1	Q6ZSZ6	1077 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	XYLT1	Q86Y38	959 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	APOBEC3F	Q8IUX4	373 aa	Known RBP	24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	FBXO36	Q8NEA4	188 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	DCAKD	Q8WVC6	231 aa		24.52	■■□□□ 1.52
GSDMD-208	ENST00000528475	FGFR1	P11362	822 aa		24.51	■■□□□ 1.51
GSDMD-208	ENST00000528475	RASSF2	P50749	326 aa		24.51	■■□□□ 1.51
GSDMD-208	ENST00000528475	CBLB	Q13191	982 aa		24.51	■■□□□ 1.51
GSDMD-208	ENST00000528475	METTL7B	Q6UX53	244 aa		24.51	■■□□□ 1.51
GSDMD-208	ENST00000528475	ZNF276	Q8N554	614 aa		24.51	■■□□□ 1.51
GSDMD-208	ENST00000528475	BANP	Q8N9N5	519 aa		24.51	■■□□□ 1.51
GSDMD-208	ENST00000528475	MRRF	Q96E11	262 aa	Known RBP	24.51	■■□□□ 1.51
GSDMD-208	ENST00000528475	VPS11	Q9H270	941 aa		24.51	■■□□□ 1.51
GSDMD-208	ENST00000528475	NFKBIE	O00221	500 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	T-ENOL	P0DO92	83 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	CD19	P15391	556 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	EFTUD2	Q15029	972 aa	Known RBP eCLIP	24.5	■■□□□ 1.51	3e-6	■■■■□ 22
GSDMD-208	ENST00000528475	R3HDM1	Q15032	1099 aa	Known RBP	24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	KCNT1	Q5JUK3	1230 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	FYB2	Q5VWT5	728 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	PDIK1L	Q8N165	341 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	RNF149	Q8NC42	400 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	THOC1	Q96FV9	657 aa	Known RBP	24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	TJP2	Q9UDY2	1190 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	TMEM63A	O94886	807 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	SRGAP2C	P0DJJ0	459 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	RAD23B	P54727	409 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	CRYM	Q14894	314 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	UNC45B	Q8IWX7	931 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	PALM2	Q8IXS6	379 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	POLI	Q9UNA4	740 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	WDR90	Q96KV7	1748 aa		24.5	■■□□□ 1.51
GSDMD-208	ENST00000528475	HNRNPCL1	O60812	293 aa	Known RBP	24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	RPSA	P08865	295 aa	Known RBP	24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	ATP2A2	P16615	1042 aa	Known RBP	24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	TARS	P26639	723 aa	Known RBP	24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	PSMC4	P43686	418 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	GABRB2	P47870	512 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	RNASEL	Q05823	741 aa	Known RBP	24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	LBX2	Q6XYB7	198 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	RIOX2	Q8IUF8	465 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	MCRS1	Q96EZ8	462 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	ANKRD27	Q96NW4	1050 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	CPXM1	Q96SM3	734 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	C10orf88	Q9H8K7	445 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	SAR1A	Q9NR31	198 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	METTL5	Q9NRN9	209 aa	Known RBP	24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	XPO7	Q9UIA9	1087 aa	Known RBP	24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	HAO1	Q9UJM8	370 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	RPL26L1	Q9UNX3	145 aa	Known RBP	24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	FZD1	Q9UP38	647 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	SOWAHB	A6NEL2	793 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	ACKR2	O00590	384 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	IL18RAP	O95256	599 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	ITGBL1	O95965	494 aa	Predicted RBP	24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	ADRA1D	P25100	572 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	CLNS1A	P54105	237 aa	Known RBP	24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	EIF3E	P60228	445 aa	Known RBP	24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	RFX6	Q8HWS3	928 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	KCTD6	Q8NC69	237 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	FZD8	Q9H461	694 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	BATF3	Q9NR55	127 aa		24.49	■■□□□ 1.51
GSDMD-208	ENST00000528475	ANK1	P16157	1881 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475		A0A0G2JMZ2	1700 aa		24.48	■■□□□ 1.51
GSDMD-208	ENST00000528475	TCRBV7S3A2	A0A539	114 aa		24.48	■■□□□ 1.51

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms