RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 CBX6O95503 412 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 KRT7P08729 469 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 KRT3P12035 628 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 RAP1GAPP47736 663 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 TFAMQ00059 246 aaKnown RBP12.23□□□□□ -0.45
LINC01001-201ENST00000526704 MTM1Q13496 603 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 TRPC3Q13507 836 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 CRYMQ14894 314 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 ZC3H12AQ5D1E8 599 aaKnown RBP12.23□□□□□ -0.45
LINC01001-201ENST00000526704 ZNF449Q6P9G9 518 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 CCDC125Q86Z20 511 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 UNC45BQ8IWX7 931 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 MICALL2Q8IY33 904 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 TCHPQ9BT92 498 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 C12orf65Q9H3J6 166 aaKnown RBP12.23□□□□□ -0.45
LINC01001-201ENST00000526704 NPHS2Q9NP85 383 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 KANSL3Q9P2N6 904 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 NKX1-2Q9UD57 310 aaPredicted RBP12.23□□□□□ -0.45
LINC01001-201ENST00000526704 TRIP11Q15643 1979 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 MCM3APO60318 1980 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 C2CD2LO14523 706 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 PEX11AO75192 247 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 PRKCBP05771 671 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 EFNA5P52803 228 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 KLHL38Q2WGJ6 581 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 PLEKHG4Q58EX7 1191 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 SPDYAQ5MJ70 313 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 PRAMEF18Q5VWM3 479 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 C3orf62Q6ZUJ4 267 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 NLRP9Q7RTR0 991 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 EMC1Q8N766 993 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 BANPQ8N9N5 519 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 TTC13Q8NBP0 860 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 FAM13CQ8NE31 585 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 DNERQ8NFT8 737 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 TCP10LQ8TDR4 215 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 FNIP1Q8TF40 1166 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 RSAD2Q8WXG1 361 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 JDP2Q8WYK2 163 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 METTL5Q9NRN9 209 aaKnown RBP12.22□□□□□ -0.45
LINC01001-201ENST00000526704 SLC17A7Q9P2U7 560 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 C19orf81C9J6K1 198 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 GM2AP17900 193 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 CCNG1P51959 295 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 HIRAP54198 1017 aaPredicted RBP12.22□□□□□ -0.45
LINC01001-201ENST00000526704 PSMC1P62191 440 aaKnown RBP12.22□□□□□ -0.45
LINC01001-201ENST00000526704 YWHAEP62258 255 aaKnown RBP12.22□□□□□ -0.45
LINC01001-201ENST00000526704 NAA25Q14CX7 972 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 TAF1BQ53T94 588 aaPredicted RBP12.22□□□□□ -0.45
LINC01001-201ENST00000526704 SLC45A4Q5BKX6 768 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 ANKRD20A2Q5SQ80 823 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 ANKRD20A1Q5TYW2 823 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 ANKRD20A3Q5VUR7 823 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 XYLT1Q86Y38 959 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 THNSL1Q8IYQ7 743 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 CPXM1Q96SM3 734 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 TBC1D10AQ9BXI6 508 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 LHX5Q9H2C1 402 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 NRBP2Q9NSY0 501 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 XPO7Q9UIA9 1087 aaKnown RBP12.22□□□□□ -0.45
LINC01001-201ENST00000526704 AFG3L2Q9Y4W6 797 aa12.22□□□□□ -0.45
LINC01001-201ENST00000526704 WDR91A4D1P6 747 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 GOLGA8RI6L899 631 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 PEX10O60683 326 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 ERBB2P04626 1255 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 CD19P15391 556 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 RPS12P25398 132 aaKnown RBP12.21□□□□□ -0.45
LINC01001-201ENST00000526704 EPHB2P29323 1055 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 POLR2BP30876 1174 aaKnown RBP12.21□□□□□ -0.45
LINC01001-201ENST00000526704 GMPSP49915 693 aaPredicted RBP12.21□□□□□ -0.45
LINC01001-201ENST00000526704 STAT5BP51692 787 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 NRLP54845 237 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 RNASELQ05823 741 aaKnown RBP12.21□□□□□ -0.45
LINC01001-201ENST00000526704 EN1Q05925 392 aaPredicted RBP12.21□□□□□ -0.45
LINC01001-201ENST00000526704 TAF5Q15542 800 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 HADHQ16836 314 aaKnown RBP12.21□□□□□ -0.45
LINC01001-201ENST00000526704 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 BBS9Q3SYG4 887 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 FYB2Q5VWT5 728 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 LONP2Q86WA8 852 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 TMEM130Q8N3G9 435 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 RFWD2Q8NHY2 731 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 ZNF398Q8TD17 642 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 KCNV2Q8TDN2 545 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 CAMKK2Q96RR4 588 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 KLF6Q99612 283 aaPredicted RBP12.21□□□□□ -0.45
LINC01001-201ENST00000526704 MAF1Q9H063 256 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 ZFP69BQ9UJL9 534 aa12.21□□□□□ -0.45
LINC01001-201ENST00000526704 POLR2AP24928 1970 aaKnown RBP12.21□□□□□ -0.46
LINC01001-201ENST00000526704 TRAFD1O14545 582 aaPredicted RBP12.21□□□□□ -0.46
LINC01001-201ENST00000526704 TM9SF1O15321 606 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 SRGAP2CP0DJJ0 459 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 GNAZP19086 355 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 PROZP22891 400 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 TCF7P36402 384 aaPredicted RBP12.21□□□□□ -0.46
LINC01001-201ENST00000526704 LAMTOR4Q0VGL1 99 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 ORC1Q13415 861 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 SURF1Q15526 300 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 FAM160B1Q5W0V3 765 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 BZW1Q7L1Q6 419 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms