RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 MYH10P35580 1976 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 GREB1Q4ZG55 1949 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 DENND4CQ5VZ89 1909 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 F8VP50 259 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 TRIM66O15016 1216 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 NARSO43776 548 aaKnown RBP17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 GPR37L1O60883 481 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 TRIM21P19474 475 aaKnown RBP17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 CDC25CP30307 473 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 CACNA2D1P54289 1103 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 SIGLEC14Q08ET2 396 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 ARHGAP15Q53QZ3 475 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 GPR158Q5T848 1215 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 TANGO2Q6ICL3 276 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 FUKQ8N0W3 1084 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 LMO3Q8TAP4 145 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 SMARCD2Q92925 531 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 MYRFLQ96LU7 910 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 CEP295NLQ96MC4 621 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 ASB16Q96NS5 453 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 ARID3AQ99856 593 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 KXD1Q9BQD3 176 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 DNAI2Q9GZS0 605 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 SLITRK6Q9H5Y7 841 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 TMEM30AQ9NV96 361 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 TMEM63CQ9P1W3 806 aa17.24■□□□□ 0.35
SSSCA1-202ENST00000526433 ATP8B3O60423 1300 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 CCDC130P13994 396 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 MTIF2P46199 727 aaKnown RBP17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 CYP4F8P98187 520 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 CUL2Q13617 745 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 ZNF394Q53GI3 561 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 TMEM31Q5JXX7 168 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 STXBP5Q5T5C0 1151 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 TMEM150AQ86TG1 271 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 FAM35AQ86V20 835 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 FAM114A1Q8IWE2 563 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 ZSCAN18Q8TBC5 510 aaPredicted RBP17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 SLC2A14Q8TDB8 520 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 CYFIP2Q96F07 1278 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 TRMT2BQ96GJ1 504 aaKnown RBP17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 HEXIM2Q96MH2 286 aaKnown RBP17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 NT5C1BQ96P26 610 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 GCNAQ96QF7 691 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 KCNK16Q96T55 309 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 PLA2G2FQ9BZM2 168 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 FAM124BQ9H5Z6 455 aaPredicted RBP17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 TASP1Q9H6P5 420 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 ZFP14Q9HCL3 533 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 FAM49BQ9NUQ9 324 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 ANO10Q9NW15 660 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 UXTQ9UBK9 157 aaPredicted RBP17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 DUSP12Q9UNI6 340 aa17.23■□□□□ 0.35
SSSCA1-202ENST00000526433 TMEM221A6NGB7 291 aa17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 M0R296 226 aa17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 ECI2O75521 394 aa17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 DENND5BQ6ZUT9 1274 aa17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 GPIHBP1Q8IV16 184 aa17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 ENOX1Q8TC92 643 aaKnown RBP17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 ELSPBP1Q96BH3 223 aa17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 SMARCD1Q96GM5 515 aa17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 TMEM176AQ96HP8 235 aa17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 HNRNPABQ99729 332 aaKnown RBP17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 LRFN3Q9BTN0 628 aa17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 SLC46A2Q9BY10 475 aa17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 TRPV4Q9HBA0 871 aa17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 ZNF638Q14966 1978 aaKnown RBP17.22■□□□□ 0.35
SSSCA1-202ENST00000526433 AP1G2O75843 785 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 SRFP11831 508 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 FCARP24071 287 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 TBXAS1P24557 533 aaPredicted RBP17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 ADORA2BP29275 332 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 VIPR2P41587 438 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 RAD23BP54727 409 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 USP46P62068 366 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 YWHAEP62258 255 aaKnown RBP17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 GPC5P78333 572 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 HSP90AA4PQ58FG1 418 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 ARID3BQ8IVW6 561 aaPredicted RBP17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 NUP93Q8N1F7 819 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 SLC4A11Q8NBS3 891 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 MRPS31Q92665 395 aaKnown RBP17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 ASIC4Q96FT7 647 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 SMOQ99835 787 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 INTS2Q9H0H0 1204 aaKnown RBP17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 SAMSN1Q9NSI8 373 aaKnown RBP17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 EHD2Q9NZN4 543 aa17.21■□□□□ 0.35
SSSCA1-202ENST00000526433 BEST1O76090 585 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 STX1AQ16623 288 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 MAN2A1Q16706 1144 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 PPP1R26Q5T8A7 1209 aaPredicted RBP17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 TXNDC8Q6A555 127 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 RRAGAQ7L523 313 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 MON1AQ86VX9 555 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 PPM1KQ8N3J5 372 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 UBR7Q8N806 425 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 MAB21L3Q8N8X9 362 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 ZMIZ2Q8NF64 920 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 CRACR2AQ9BSW2 395 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms