RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 NCOA4Q13772 614 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 MAPRE1Q15691 268 aaKnown RBP11.18□□□□□ -0.62
RBBP4-216ENST00000525506 CFAP221Q4G0U5 840 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 ARHGAP15Q53QZ3 475 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 YAF2Q8IY57 180 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 SMYD4Q8IYR2 804 aaPredicted RBP11.18□□□□□ -0.62
RBBP4-216ENST00000525506 ZNF687Q8N1G0 1237 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 MAB21L3Q8N8X9 362 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 DEPDC1BQ8WUY9 529 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 KBTBD7Q8WVZ9 684 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 ELMO3Q96BJ8 720 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 FUBP3Q96I24 572 aaKnown RBP eCLIP11.18□□□□□ -0.62
RBBP4-216ENST00000525506 FAM124BQ9H5Z6 455 aaPredicted RBP11.18□□□□□ -0.62
RBBP4-216ENST00000525506 TASP1Q9H6P5 420 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 KIAA1468Q9P260 1216 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 NME7Q9Y5B8 376 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 PIAS3Q9Y6X2 628 aa11.18□□□□□ -0.62
RBBP4-216ENST00000525506 HELZP42694 1942 aaKnown RBP11.17□□□□□ -0.62
RBBP4-216ENST00000525506 DMDP11532 3685 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 SLC38A8A6NNN8 435 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 DPYSL4O14531 572 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 PHACTR2O75167 634 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 FGF19O95750 216 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 F11P03951 625 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 CDC25CP30307 473 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 NLRP12P59046 1061 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 TNNC1P63316 161 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 BIRC3Q13489 604 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 SGSM1Q2NKQ1 1148 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 ZNF699Q32M78 642 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 WDR72Q3MJ13 1102 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 C1orf220Q5T0J3 134 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 TXNDC8Q6A555 127 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 TSSK4Q6SA08 328 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 SV2AQ7L0J3 742 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 SPATA2LQ8IUW3 424 aaPredicted RBP11.17□□□□□ -0.62
RBBP4-216ENST00000525506 SCN4BQ8IWT1 228 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 FAM3CQ92520 227 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 CLDN23Q96B33 292 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 CEP63Q96MT8 703 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 GCNAQ96QF7 691 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 MMS19Q96T76 1030 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 SYT15Q9BQS2 421 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 MRPL45Q9BRJ2 306 aaKnown RBP11.17□□□□□ -0.62
RBBP4-216ENST00000525506 OSBPL6Q9BZF3 934 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 TMEM8AQ9HCN3 771 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 CRTAC1Q9NQ79 661 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 GTSE1Q9NYZ3 720 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 CDH9Q9ULB4 789 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 CCL26Q9Y258 94 aa11.17□□□□□ -0.62
RBBP4-216ENST00000525506 EP300Q09472 2414 aaPredicted RBP11.16□□□□□ -0.62
RBBP4-216ENST00000525506 GOLGA6L22H0YM25 854 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 CHADO15335 359 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 LAMTOR5O43504 91 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 VNN1O95497 513 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 ASS1P00966 412 aaKnown RBP11.16□□□□□ -0.62
RBBP4-216ENST00000525506 CSH1P0DML2 217 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 CSH2P0DML3 217 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 BMP6P22004 513 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 BDNFP23560 247 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 MAGEA11P43364 429 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 MYL6P60660 151 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 DLG4P78352 724 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 CSTF1Q05048 431 aaKnown RBP11.16□□□□□ -0.62
RBBP4-216ENST00000525506 TNK2Q07912 1038 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 FCHO2Q0JRZ9 810 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 MTAPQ13126 283 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 ZNF667Q5HYK9 610 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 WDR44Q5JSH3 913 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 ANKRD40Q6AI12 368 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 TTI2Q6NXR4 508 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 FAM171BQ6P995 826 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 C4orf50Q6ZRC1 276 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 CMTM8Q8IZV2 173 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 RIN3Q8TB24 985 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 CSGALNACT1Q8TDX6 532 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 ERCC4Q92889 916 aaPredicted RBP11.16□□□□□ -0.62
RBBP4-216ENST00000525506 MYLPFQ96A32 169 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 E2F7Q96AV8 911 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 NELL2Q99435 816 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 IMPG2Q9BZV3 1241 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 CLSTN2Q9H4D0 955 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 LMAN1LQ9HAT1 526 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 METTL14Q9HCE5 456 aaKnown RBP11.16□□□□□ -0.62
RBBP4-216ENST00000525506 TRPV5Q9NQA5 729 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 ZMYM5Q9UJ78 669 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 MRPS17Q9Y2R5 130 aaKnown RBP11.16□□□□□ -0.62
RBBP4-216ENST00000525506 MYOFQ9NZM1 2061 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 SPTBN4Q9H254 2564 aa11.16□□□□□ -0.62
RBBP4-216ENST00000525506 SOBPA7XYQ1 873 aa11.15□□□□□ -0.62
RBBP4-216ENST00000525506 PPP1R3GB7ZBB8 358 aa11.15□□□□□ -0.62
RBBP4-216ENST00000525506 MAN2B1O00754 1011 aa11.15□□□□□ -0.62
RBBP4-216ENST00000525506 PMM2O15305 246 aa11.15□□□□□ -0.62
RBBP4-216ENST00000525506 NCAM2O15394 837 aa11.15□□□□□ -0.62
RBBP4-216ENST00000525506 TADA3O75528 432 aa11.15□□□□□ -0.62
RBBP4-216ENST00000525506 GNA14O95837 355 aa11.15□□□□□ -0.62
RBBP4-216ENST00000525506 GNL1P36915 607 aaPredicted RBP11.15□□□□□ -0.62
RBBP4-216ENST00000525506 PIK3CAP42336 1068 aa11.15□□□□□ -0.62
RBBP4-216ENST00000525506 KPNA1P52294 538 aaPredicted RBP11.15□□□□□ -0.62
RBBP4-216ENST00000525506 PMS1P54277 932 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms