RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 ELOVL4Q9GZR5 314 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 ATXN3LQ9H3M9 355 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 TRPV4Q9HBA0 871 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 CISHQ9NSE2 258 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 TMEM30AQ9NV96 361 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 UXTQ9UBK9 157 aaPredicted RBP13.77□□□□□ -0.21
CTSB-209ENST00000525315 DUSP12Q9UNI6 340 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 NUMBLQ9Y6R0 609 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 FCARP24071 287 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 CACNA2D1P54289 1103 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 ORC1Q13415 861 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 CUL2Q13617 745 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 TPD52L1Q16890 204 aaPredicted RBP13.76□□□□□ -0.21
CTSB-209ENST00000525315 FAM78AQ5JUQ0 283 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 TANGO2Q6ICL3 276 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 SASS6Q6UVJ0 657 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 FUKQ8N0W3 1084 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 UBR7Q8N806 425 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 C12orf29Q8N999 325 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 ENOX1Q8TC92 643 aaKnown RBP13.76□□□□□ -0.21
CTSB-209ENST00000525315 ELSPBP1Q96BH3 223 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 ASIC4Q96FT7 647 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 ASB16Q96NS5 453 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 HNRNPABQ99729 332 aaKnown RBP13.76□□□□□ -0.21
CTSB-209ENST00000525315 ZNF518BQ9C0D4 1074 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 SMOC2Q9H3U7 446 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 CSNK1G1Q9HCP0 422 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 TMEM63CQ9P1W3 806 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 ZMYM5Q9UJ78 669 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 PATJQ8NI35 1801 aa13.76□□□□□ -0.21
CTSB-209ENST00000525315 ATP8B3O60423 1300 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 F8VP50 259 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 SRFP11831 508 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 CD58P19256 250 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 TBXAS1P24557 533 aaPredicted RBP13.75□□□□□ -0.21
CTSB-209ENST00000525315 DDX6P26196 483 aaKnown RBP eCLIP13.75□□□□□ -0.21
CTSB-209ENST00000525315 ANXA13P27216 316 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 RAD23BP54727 409 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 ARHGAP15Q53QZ3 475 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 DENND5BQ6ZUT9 1274 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 BMP8AQ7Z5Y6 402 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 FAM35AQ86V20 835 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 SLC4A11Q8NBS3 891 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 STKLD1Q8NE28 680 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 ST13P5Q8NFI4 369 aaPredicted RBP13.75□□□□□ -0.21
CTSB-209ENST00000525315 ZSCAN18Q8TBC5 510 aaPredicted RBP13.75□□□□□ -0.21
CTSB-209ENST00000525315 SMARCD2Q92925 531 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 CYFIP2Q96F07 1278 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 SMARCD1Q96GM5 515 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 TMEM176AQ96HP8 235 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 KCNK16Q96T55 309 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 ARID3AQ99856 593 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 MED10Q9BTT4 135 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 TTLL2Q9BWV7 592 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 PLA2G2FQ9BZM2 168 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 DNAI2Q9GZS0 605 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 TASP1Q9H6P5 420 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 ZFP14Q9HCL3 533 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 ANO10Q9NW15 660 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 IL37Q9NZH6 218 aa13.75□□□□□ -0.21
CTSB-209ENST00000525315 MAGED2Q9UNF1 606 aaPredicted RBP13.75□□□□□ -0.21
CTSB-209ENST00000525315 GTPBP10A4D1E9 387 aaKnown RBP13.74□□□□□ -0.21
CTSB-209ENST00000525315 TMEM221A6NGB7 291 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 PRR33A8MZF0 331 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 M0R296 226 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 TNFRSF10BO14763 440 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 NARSO43776 548 aaKnown RBP13.74□□□□□ -0.21
CTSB-209ENST00000525315 CCDC130P13994 396 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 TRIM21P19474 475 aaKnown RBP13.74□□□□□ -0.21
CTSB-209ENST00000525315 YWHAEP62258 255 aaKnown RBP13.74□□□□□ -0.21
CTSB-209ENST00000525315 LRMPQ12912 555 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 TMEM31Q5JXX7 168 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 STXBP5Q5T5C0 1151 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 GPR158Q5T848 1215 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 CREBRFQ8IUR6 639 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 FAM114A1Q8IWE2 563 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 NUP93Q8N1F7 819 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 ZMIZ2Q8NF64 920 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 SLC2A14Q8TDB8 520 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 E2F7Q96AV8 911 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 NT5C1BQ96P26 610 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 SMOQ99835 787 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 KXD1Q9BQD3 176 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 LRFN3Q9BTN0 628 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 SLC46A2Q9BY10 475 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 SLC2A4RGQ9NR83 387 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 SAMSN1Q9NSI8 373 aaKnown RBP13.74□□□□□ -0.21
CTSB-209ENST00000525315 COMMD8Q9NX08 183 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 EHD2Q9NZN4 543 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 WNT16Q9UBV4 365 aa13.74□□□□□ -0.21
CTSB-209ENST00000525315 HELZP42694 1942 aaKnown RBP13.73□□□□□ -0.21
CTSB-209ENST00000525315 TADA3O75528 432 aa13.73□□□□□ -0.21
CTSB-209ENST00000525315 AP1G2O75843 785 aa13.73□□□□□ -0.21
CTSB-209ENST00000525315 BEST1O76090 585 aa13.73□□□□□ -0.21
CTSB-209ENST00000525315 ACO1P21399 889 aaKnown RBP13.73□□□□□ -0.21
CTSB-209ENST00000525315 VIPR2P41587 438 aa13.73□□□□□ -0.21
CTSB-209ENST00000525315 MTIF2P46199 727 aaKnown RBP13.73□□□□□ -0.21
CTSB-209ENST00000525315 PPP3CCP48454 512 aa13.73□□□□□ -0.21
CTSB-209ENST00000525315 USP46P62068 366 aa13.73□□□□□ -0.21
CTSB-209ENST00000525315 GPC5P78333 572 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms