RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 MRPS31Q92665 395 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 ZFYVE19Q96K21 471 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 PHOX2BQ99453 314 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 MED10Q9BTT4 135 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 APOBEC3GQ9HC16 384 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 TMEM30AQ9NV96 361 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 HMGXB4Q9UGU5 601 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 ZDBF2Q9HCK1 2354 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 TICRRQ7Z2Z1 1910 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 OBSL1O75147 1896 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 NUP210Q8TEM1 1887 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 KANSL1LA0AUZ9 987 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 FAM170BA6NMN3 283 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 F8VP50 259 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 TADA3O75528 432 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 P4HA1P13674 534 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 BMP6P22004 513 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 ASPAP45381 313 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 NDST1P52848 882 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 USP46P62068 366 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 TCERG1LQ5VWI1 586 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 KLHL10Q6JEL2 608 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 VSTM1Q6UX27 236 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 ELOA2Q8IYF1 753 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 CCDC105Q8IYK2 499 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 CMTM8Q8IZV2 173 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 TTC16Q8NEE8 873 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 PJA1Q8NG27 643 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 TAF4BQ92750 862 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 SEMA4DQ92854 862 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 ATOH1Q92858 354 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 IRF7Q92985 503 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 E2F7Q96AV8 911 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 TRMT2BQ96GJ1 504 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 SPATA17Q96L03 361 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 MYRFLQ96LU7 910 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 TMEM8AQ9HCN3 771 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 TRPC7Q9HCX4 862 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 UXTQ9UBK9 157 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 CCL26Q9Y258 94 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 PTPRDP23468 1912 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 DENND4CQ5VZ89 1909 aa13.68□□□□□ -0.22
TRAPPC4-205ENST00000525079 SHISA7A6NL88 538 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 TRIM66O15016 1216 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 GLULP15104 373 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 CD58P19256 250 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 CCNE1P24864 410 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 AVPR1AP37288 418 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 NUBP1P53384 320 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 NOP14P78316 857 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 FKBP3Q00688 224 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 IFRD2Q12894 506 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 STIM1Q13586 685 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 CAMK4Q16566 473 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 DCAF17Q5H9S7 520 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 DENND5BQ6ZUT9 1274 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 PAQR9Q6ZVX9 377 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 MON1AQ86VX9 555 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 CELF5Q8N6W0 485 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 BPIFB1Q8TDL5 484 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 DNASE1L2Q92874 299 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 USP13Q92995 863 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 SLC22A12Q96S37 553 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 CYP2S1Q96SQ9 504 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 KCNK16Q96T55 309 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 DDX23Q9BUQ8 820 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 IMPG2Q9BZV3 1241 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 ELOVL4Q9GZR5 314 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 LTB4R2Q9NPC1 389 aa13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 NDRG2Q9UN36 371 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-205ENST00000525079 GREB1Q4ZG55 1949 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 C2orf78A6NCI8 922 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 PPP1R3GB7ZBB8 358 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 PSMA7O14818 248 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 CHADO15335 359 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 CCDC130P13994 396 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 DDX6P26196 483 aaKnown RBP eCLIP13.66□□□□□ -0.223e-7■□□□□ 9.5
TRAPPC4-205ENST00000525079 TARSP26639 723 aaKnown RBP13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 GTF2H1P32780 548 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 SOX9P48436 509 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 MXI1P50539 228 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 STX17P56962 302 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 UBE2HP62256 183 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 LRRC63Q05C16 580 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 ENPEPQ07075 957 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 FCHO2Q0JRZ9 810 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 MORC3Q14149 939 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 KRT39Q6A163 491 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 ZNF852Q6ZMS4 543 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 FAM35AQ86V20 835 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 ALYREFQ86V81 257 aaKnown RBP13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 ZC3H3Q8IXZ2 948 aaKnown RBP13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 ARL14EPQ8N8R7 260 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 CCDC150Q8NCX0 1101 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 CSGALNACT1Q8TDX6 532 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 NELFBQ8WX92 580 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 DHTKD1Q96HY7 919 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 TNIP3Q96KP6 325 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 C8orf48Q96LL4 319 aa13.66□□□□□ -0.22
TRAPPC4-205ENST00000525079 TWNKQ96RR1 684 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms