RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 GDF15Q99988 308 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 HEYLQ9NQ87 328 aaPredicted RBP6.89□□□□□ -1.31
SKP1-213ENST00000524288 GPR52Q9Y2T5 361 aa6.89□□□□□ -1.31
SKP1-213ENST00000524288 A0A087X1B8 175 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 AREL1O15033 823 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 ZNF185O15231 689 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 VEGFAP15692 232 aaPredicted RBP6.88□□□□□ -1.31
SKP1-213ENST00000524288 PTDSS1P48651 473 aaKnown RBP6.88□□□□□ -1.31
SKP1-213ENST00000524288 ZNF134P52741 427 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 HSD11B2P80365 405 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 ZNF844Q08AG5 666 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 SPARCL1Q14515 664 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 IQCB1Q15051 598 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 POSTNQ15063 836 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 TAF5Q15542 800 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 SMN1Q16637 294 aaKnown RBP6.88□□□□□ -1.31
SKP1-213ENST00000524288 TIGD6Q17RP2 521 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 ZIK1Q3SY52 487 aaPredicted RBP6.88□□□□□ -1.31
SKP1-213ENST00000524288 METRNLQ641Q3 311 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 DRICH1Q6PGQ1 229 aaPredicted RBP6.88□□□□□ -1.31
SKP1-213ENST00000524288 TMED8Q6PL24 325 aaPredicted RBP6.88□□□□□ -1.31
SKP1-213ENST00000524288 MRGPRGQ86SM5 289 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 LDLRAD3Q86YD5 345 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 SUGP1Q8IWZ8 645 aaKnown RBP6.88□□□□□ -1.31
SKP1-213ENST00000524288 ULK2Q8IYT8 1036 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 PAF1Q8N7H5 531 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 MNTQ99583 582 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 TEX101Q9BY14 249 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 IKZF4Q9H2S9 585 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 RGL1Q9NZL6 768 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 CLCA2Q9UQC9 943 aa6.88□□□□□ -1.31
SKP1-213ENST00000524288 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.88□□□□□ -1.31
SKP1-213ENST00000524288 ZCCHC6Q5VYS8 1495 aaKnown RBP6.87□□□□□ -1.31
SKP1-213ENST00000524288 LOC102723971A0A1B0GUV8 181 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 hCG_1984214I3L0E3 225 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 TOR1BO14657 336 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 HNRNPDLO14979 420 aaKnown RBP6.87□□□□□ -1.31
SKP1-213ENST00000524288 TPH1P17752 444 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 VIPR2P41587 438 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 CPT1AP50416 773 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 SLC25A3Q00325 362 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 PIGFQ07326 219 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 ARHGEF7Q14155 803 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 RABL3Q5HYI8 236 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 METTL24Q5JXM2 366 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 FAM102AQ5T9C2 384 aaPredicted RBP6.87□□□□□ -1.31
SKP1-213ENST00000524288 PLAG1Q6DJT9 500 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 OR56A1Q8NGH5 318 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 MESP1Q9BRJ9 268 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 PAGR1Q9BTK6 254 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 REXO4Q9GZR2 422 aaKnown RBP6.87□□□□□ -1.31
SKP1-213ENST00000524288 PCDHAC1Q9H158 963 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 ITM2CQ9NQX7 267 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 SLC2A4RGQ9NR83 387 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 ZSCAN32Q9NX65 697 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
SKP1-213ENST00000524288 SCAF8Q9UPN6 1271 aaKnown RBP6.87□□□□□ -1.31
SKP1-213ENST00000524288 MRPS17Q9Y2R5 130 aaKnown RBP6.87□□□□□ -1.31
SKP1-213ENST00000524288 M0R3H8 397 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 ASNA1O43681 348 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 ERN1O75460 977 aaKnown RBP6.86□□□□□ -1.31
SKP1-213ENST00000524288 RASAL1O95294 804 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 SPATA31D3P0C874 917 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 FGFR4P22455 802 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 MAPK9P45984 424 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 GCLCP48506 637 aaPredicted RBP6.86□□□□□ -1.31
SKP1-213ENST00000524288 WNT3P56703 355 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 TCF15Q12870 199 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 PRKG1Q13976 671 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 AGAP9Q5VTM2 703 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 RAP1GAP2Q684P5 730 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 FCRL6Q6DN72 434 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 JMJD6Q6NYC1 403 aaPredicted RBP6.86□□□□□ -1.31
SKP1-213ENST00000524288 LAYNQ6UX15 382 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 SPATA31D4Q6ZUB0 917 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 RHOT2Q8IXI1 618 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 CYP2W1Q8TAV3 490 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 SLC25A43Q8WUT9 341 aaPredicted RBP6.86□□□□□ -1.31
SKP1-213ENST00000524288 SNX27Q96L92 541 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 PNKPQ96T60 521 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 KRTAP17-1Q9BYP8 105 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 TM7SF3Q9NS93 570 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 RRN3Q9NYV6 651 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 C9orf78Q9NZ63 289 aaPredicted RBP6.86□□□□□ -1.31
SKP1-213ENST00000524288 EIF2B4Q9UI10 523 aaKnown RBP6.86□□□□□ -1.31
SKP1-213ENST00000524288 ZMYND8Q9ULU4 1186 aaPredicted RBP6.86□□□□□ -1.31
SKP1-213ENST00000524288 GTF2A1LQ9UNN4 478 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 RAD54BQ9Y620 910 aa6.86□□□□□ -1.31
SKP1-213ENST00000524288 CCDC195A0A1B0GUA6 201 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 SYT5O00445 386 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 RRP9O43818 475 aaKnown RBP6.85□□□□□ -1.31
SKP1-213ENST00000524288 PECAM1P16284 738 aaPredicted RBP6.85□□□□□ -1.31
SKP1-213ENST00000524288 YY1P25490 414 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 ATICP31939 592 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 SERPINF1P36955 418 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 COPAP53621 1224 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 LIN54Q6MZP7 749 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 TMEM108Q6UXF1 575 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 GAS2L3Q86XJ1 694 aa6.85□□□□□ -1.31
SKP1-213ENST00000524288 BPIFB1Q8TDL5 484 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms